GXD: a gene expression database for the laboratory mouse

被引:32
作者
Ringwald, M [1 ]
Mangan, ME [1 ]
Eppig, JT [1 ]
Kadin, JA [1 ]
Richardson, JE [1 ]
机构
[1] Jackson Lab, Bar Harbor, ME 04609 USA
关键词
D O I
10.1093/nar/27.1.106
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The Gene Expression Database (GXD) is a community resource that stores and integrates expression information for the laboratory mouse, with a particular emphasis on mouse development, and makes these data freely available in formats appropriate for comprehensive analysis, GXD is implemented as a relational database and integrated with the Mouse Genome Database (MGD) to enable global analysis of genotype, expression and phenotype information. interconnections with sequence databases and with databases from other species further extend GXD's utility for the analysis of gene expression data. GXD is available through the Mouse Genome Informatics Web Site at http://www.informatics.jax.org/.
引用
收藏
页码:106 / 112
页数:7
相关论文
共 14 条
[1]   The SWISS-PROT protein sequence data bank and its supplement TrEMBL in 1998 [J].
Bairoch, A ;
Apweiler, R .
NUCLEIC ACIDS RESEARCH, 1998, 26 (01) :38-42
[2]   3-D reconstructions for graphical databases of gene expression [J].
Baldock, RA ;
Verbeek, FJ ;
Vonesch, JL .
SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY, 1997, 8 (05) :499-507
[3]   An internet-accessible database of mouse developmental anatomy based on a systematic nomenclature [J].
Bard, JBL ;
Kaufman, MH ;
Dubreuil, C ;
Brune, RM ;
Burger, A ;
Baldock, RA ;
Davidson, DR .
MECHANISMS OF DEVELOPMENT, 1998, 74 (1-2) :111-120
[4]   GenBank [J].
Benson, DA ;
Boguski, MS ;
Lipman, DJ ;
Ostell, J ;
Ouellette, BFF .
NUCLEIC ACIDS RESEARCH, 1998, 26 (01) :1-7
[5]   The mouse atlas and graphical gene-expression database [J].
Davidson, D ;
Bard, J ;
Brune, R ;
Burger, A ;
Dubreuil, C ;
Hill, W ;
Kaufman, M ;
Quinn, J ;
Stark, M ;
Baldock, R .
SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY, 1997, 8 (05) :509-517
[6]   The Genome Sequence DataBase (GSDB): improving data quality and data access [J].
Harger, C ;
Skupski, M ;
Bingham, J ;
Farmer, A ;
Hoisie, S ;
Hraber, P ;
Kiphart, D ;
Krakowski, L ;
McLeod, M ;
Schwertfeger, J ;
Seluja, G ;
Siepel, A ;
Singh, G ;
Stamper, D ;
Steadman, P ;
Thayer, N ;
Thompson, R ;
Wargo, P ;
Waugh, M ;
Zhuang, JJ ;
Schad, PA .
NUCLEIC ACIDS RESEARCH, 1998, 26 (01) :21-26
[7]   The IMAGE consortium: An integrated molecular analysis of genomes and their expression [J].
Lennon, G ;
Auffray, C ;
Polymeropoulos, M ;
Soares, MB .
GENOMICS, 1996, 33 (01) :151-152
[8]   Expression monitoring by hybridization to high-density oligonucleotide arrays [J].
Lockhart, DJ ;
Dong, HL ;
Byrne, MC ;
Follettie, MT ;
Gallo, MV ;
Chee, MS ;
Mittmann, M ;
Wang, CW ;
Kobayashi, M ;
Horton, H ;
Brown, EL .
NATURE BIOTECHNOLOGY, 1996, 14 (13) :1675-1680
[9]   DIFFERENTIAL GENE-EXPRESSION IN THE MURINE THYMUS ASSAYED BY QUANTITATIVE HYBRIDIZATION OF ARRAYED CDNA CLONES [J].
NGUYEN, C ;
ROCHA, D ;
GRANJEAUD, S ;
BALDIT, M ;
BERNARD, K ;
NAQUET, P ;
JORDAN, BR .
GENOMICS, 1995, 29 (01) :207-216
[10]   A DATABASE FOR MOUSE DEVELOPMENT [J].
RINGWALD, M ;
BALDOCK, R ;
BARD, J ;
KAUFMAN, M ;
EPPIG, JT ;
RICHARDSON, JE ;
NADEAU, JH ;
DAVIDSON, D .
SCIENCE, 1994, 265 (5181) :2033-2034