Crystal structure of FAF1 UBX domain in complex with p97/VCP N domain reveals a conformational change in the conserved FcisP touch-turn motif of UBX domain

被引:21
作者
Kim, Kyoung Hoon [2 ]
Kang, Wonchull [1 ]
Suh, Se Won [2 ,3 ]
Yang, Jin Kuk [1 ]
机构
[1] Soongsil Univ, Dept Chem, Coll Nat Sci, Seoul 156743, South Korea
[2] Seoul Natl Univ, Dept Chem, Coll Nat Sci, Seoul 151747, South Korea
[3] Seoul Natl Univ, Dept Biophys & Chem Biol, Coll Nat Sci, Seoul 151747, South Korea
关键词
Fas-associated factor 1; AAA plus family ATPase; adaptor protein binding; RAY CRYSTALLOGRAPHIC ANALYSIS; FAS-ASSOCIATED FACTOR-1; AAA ATPASE P97/VCP; PROTEIN; CRYSTALLIZATION; P47;
D O I
10.1002/prot.23073
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
引用
收藏
页码:2583 / 2587
页数:5
相关论文
共 25 条
[1]   THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY [J].
BAILEY, S .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :760-763
[2]   Conformational changes in the AAA ATPase p97-p47 adaptor complex [J].
Beuron, Fabienne ;
Dreveny, Ingrid ;
Yuan, Xuemei ;
Pye, Valerie E. ;
McKeown, Ciaran ;
Briggs, Louise C. ;
Cliff, Matthew J. ;
Kaneko, Yayoi ;
Wallis, Russell ;
Isaacson, Rivka L. ;
Ladbury, John E. ;
Matthews, Steve J. ;
Kondo, Hisao ;
Zhang, Xiaodong ;
Freemont, Paul S. .
EMBO JOURNAL, 2006, 25 (09) :1967-1976
[3]   Crystallography & NMR system:: A new software suite for macromolecular structure determination [J].
Brunger, AT ;
Adams, PD ;
Clore, GM ;
DeLano, WL ;
Gros, P ;
Grosse-Kunstleve, RW ;
Jiang, JS ;
Kuszewski, J ;
Nilges, M ;
Pannu, NS ;
Read, RJ ;
Rice, LM ;
Simonson, T ;
Warren, GL .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 :905-921
[4]   The UBX domain: A widespread ubiquitin-like module [J].
Buchberger, A ;
Howard, MJ ;
Proctor, M ;
Bycroft, M .
JOURNAL OF MOLECULAR BIOLOGY, 2001, 307 (01) :17-24
[5]   MolProbity: all-atom contacts and structure validation for proteins and nucleic acids [J].
Davis, Ian W. ;
Leaver-Fay, Andrew ;
Chen, Vincent B. ;
Block, Jeremy N. ;
Kapral, Gary J. ;
Wang, Xueyi ;
Murray, Laura W. ;
Arendall, W. Bryan, III ;
Snoeyink, Jack ;
Richardson, Jane S. ;
Richardson, David C. .
NUCLEIC ACIDS RESEARCH, 2007, 35 :W375-W383
[6]   Nucleotide dependent motion and mechanism of action of p97/VCP [J].
DeLaBarre, B ;
Brunger, AT .
JOURNAL OF MOLECULAR BIOLOGY, 2005, 347 (02) :437-452
[7]   Complete structure of p97/valosin-containing protein reveals communication between nucleotide domains [J].
DeLaBarre, B ;
Brunger, AT .
NATURE STRUCTURAL BIOLOGY, 2003, 10 (10) :856-863
[8]   Structural basis of the interaction between the AAA ATPase p97/VCP and its adaptor protein p47 [J].
Dreveny, I ;
Kondo, H ;
Uchiyama, K ;
Shaw, A ;
Zhang, XD ;
Freemont, PS .
EMBO JOURNAL, 2004, 23 (05) :1030-1039
[9]   Coot:: model-building tools for molecular graphics [J].
Emsley, P ;
Cowtan, K .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2004, 60 :2126-2132
[10]   Crystal structure of human FAF1 UBX domain reveals a novel FcisP touch-turn motif in p97/VCP-binding region [J].
Kang, Wonchull ;
Yang, Jin Kuk .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2011, 407 (03) :531-534