Utilizing state-of-the-art "omics" technology and bioinformatics to identify new biological mechanisms and biomarkers for coronary artery disease

被引:49
作者
Vernon, Stephen T. [1 ,2 ,3 ]
Hansen, Thomas [1 ,2 ,3 ]
Kott, Katharine A. [1 ,2 ,3 ]
Yang, Jean Y. [4 ,5 ]
O'Sullivan, John F. [3 ,5 ,6 ]
Figtree, Gemma A. [1 ,2 ,3 ]
机构
[1] Royal North Shore Hosp, Northern Sydney Local Hlth Dist, Cardiothorac & Vasc Hlth, Kolling Inst, Sydney, NSW, Australia
[2] Royal North Shore Hosp, Northern Sydney Local Hlth Dist, Dept Cardiol, Sydney, NSW, Australia
[3] Univ Sydney, Sydney Med Sch, Fac Med & Hlth, Sydney, NSW, Australia
[4] Univ Sydney, Sch Math & Stat, Sydney, NSW, Australia
[5] Univ Sydney, Charles Perkins Ctr, Sydney, NSW, Australia
[6] Heart Res Inst, Sydney, NSW, Australia
基金
英国医学研究理事会;
关键词
atherosclerosis; biomarkers; coronary artery disease; precision medicine; HEART-DISEASE; CARDIOVASCULAR-DISEASE; MYOCARDIAL-INFARCTION; RANDOMIZED-TRIAL; MENDELIAN RANDOMIZATION; RISK; ATHEROSCLEROSIS; MYELOPEROXIDASE; INDIVIDUALS; DISCOVERY;
D O I
10.1111/micc.12488
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Identification of the four standard modifiable cardiovascular risk factors (SMuRFs)-diabetes mellitus, hyperlipidaemia, hypertension, and cigarette smoking-has allowed the development of risk scores. These have been used in conjunction with primary and secondary prevention strategies targeting SMuRFs to reduce the burden of CAD. Recent studies show that up to 25% of ACS patients do not have any SMuRFs. Thus, SMuRFs do not explain the entire burden of CAD. There appears to be variation at the individual level rendering some individuals relatively susceptible or resilient to developing atherosclerosis. Important disease pathways remain to be discovered, and there is renewed enthusiasm to discover novel biomarkers, biological mechanisms, and therapeutic targets for atherosclerosis. Two broad approaches are being taken: traditional approaches investigating known candidate pathways and unbiased omics approaches. We review recent progress in the field and discuss opportunities made possible by technological and data science advances. Developments in network analytics and machine learning algorithms used in conjunction with large-scale multi-omic platforms have the potential to uncover biological networks that may not have been identifiable using traditional approaches. These approaches are useful for both biomedical research and precision medicine strategies.
引用
收藏
页数:9
相关论文
共 62 条
[41]   Varespladib and Cardiovascular Events in Patients With an Acute Coronary Syndrome The VISTA-16 Randomized Clinical Trial [J].
Nicholls, Stephen J. ;
Kastelein, John J. P. ;
Schwartz, Gregory G. ;
Bash, Dianna ;
Rosenson, Robert S. ;
Cavender, Matthew A. ;
Brennan, Danielle M. ;
Koenig, Wolfgang ;
Jukema, J. Wouter ;
Nambi, Vijay ;
Wright, R. Scott ;
Menon, Venu ;
Lincoff, A. Michael ;
Nissen, Steven E. .
JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION, 2014, 311 (03) :252-262
[42]   Dimethylguanidino valeric acid is a marker of liver fat and predicts diabetes [J].
O'Sullivan, John F. ;
Morningstar, Jordan E. ;
Yang, Qiong ;
Zheng, Baohui ;
Gao, Yan ;
Jeanfavre, Sarah ;
Scott, Justin ;
Fernandez, Celine ;
Zheng, Hui ;
O'Connor, Sean ;
Cohen, Paul ;
Vasan, Ramachandran S. ;
Long, Michelle T. ;
Wilson, James G. ;
Melander, Olle ;
Wang, Thomas J. ;
Fox, Caroline ;
Peterson, Randall T. ;
Clish, Clary B. ;
Corey, Kathleen E. ;
Gerszten, Robert E. .
JOURNAL OF CLINICAL INVESTIGATION, 2017, 127 (12) :4394-4402
[43]   miRNA-93-5p and other miRNAs as predictors of coronary artery disease and STEMI [J].
O'Sullivan, John F. ;
Neylon, Antoinette ;
McGorrian, Catherine ;
Blake, Gavin J. .
INTERNATIONAL JOURNAL OF CARDIOLOGY, 2016, 224 :310-316
[44]   Antiinflammatory Therapy with Canakinumab for Atherosclerotic Disease [J].
Ridker, P. M. ;
Everett, B. M. ;
Thuren, T. ;
MacFadyen, J. G. ;
Chang, W. H. ;
Ballantyne, C. ;
Fonseca, F. ;
Nicolau, J. ;
Koenig, W. ;
Anker, S. D. ;
Kastelein, J. J. P. ;
Cornel, J. H. ;
Pais, P. ;
Pella, D. ;
Genest, J. ;
Cifkova, R. ;
Lorenzatti, A. ;
Forster, T. ;
Kobalava, Z. ;
Vida-Simiti, L. ;
Flather, M. ;
Shimokawa, H. ;
Ogawa, H. ;
Dellborg, M. ;
Rossi, P. R. F. ;
Troquay, R. P. T. ;
Libby, P. ;
Glynn, R. J. .
NEW ENGLAND JOURNAL OF MEDICINE, 2017, 377 (12) :1119-1131
[45]   Development and validation of improved algorithms for the assessment of global cardiovascular risk in women - The Reynolds Risk Score [J].
Ridker, Paul M. ;
Buring, Julie E. ;
Rifai, Nader ;
Cook, Nancy R. .
JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION, 2007, 297 (06) :611-619
[46]   Omics meets hypothesis-driven research Partnership for innovative discoveries in vascular biology and angiogenesis [J].
Ruegg, Curzio ;
Tissot, Jean-Daniel ;
Farmer, Pierre ;
Mariotti, Agnese .
THROMBOSIS AND HAEMOSTASIS, 2008, 100 (05) :738-746
[47]   Comprehensive Metabolomic Profiling and Incident Cardiovascular Disease: A Systematic Review [J].
Ruiz-Canela, Miguel ;
Hruby, Adela ;
Clish, Clary B. ;
Liang, Liming ;
Martinez-Gonzalez, Miguel A. ;
Hu, Frank B. .
JOURNAL OF THE AMERICAN HEART ASSOCIATION, 2017, 6 (10)
[48]   Impact of coronary artery calcium on coronary heart disease events in individuals at the extremes of traditional risk factor burden: the Multi-Ethnic Study of Atherosclerosis [J].
Silverman, Michael G. ;
Blaha, Michael J. ;
Krumholz, Harlan M. ;
Budoff, Matthew J. ;
Blankstein, Ron ;
Sibley, Christopher T. ;
Agatston, Arthur ;
Blumenthal, Roger S. ;
Nasir, Khurram .
EUROPEAN HEART JOURNAL, 2014, 35 (33) :2232-2241
[49]   New cardiovascular risk determinants do exist and are clinically useful [J].
Smulders, Yvo M. ;
Thijs, Abel ;
Twisk, Jos W. .
EUROPEAN HEART JOURNAL, 2008, 29 (04) :436-440
[50]   P2X7 Deficiency Blocks Lesional Inflammasome Activity and Ameliorates Atherosclerosis in Mice [J].
Stachon, Peter ;
Heidenreich, Adrian ;
Merz, Julian ;
Hilgendorf, Ingo ;
Wolf, Dennis ;
Willecke, Florian ;
von Garlen, Sunaina ;
Albrecht, Philipp ;
Haerdtner, Carmen ;
Ehrat, Nicolas ;
Hoppe, Natalie ;
Reinoehl, Jochen ;
Muehlen, Constantin von zur ;
Bode, Christoph ;
Idzko, Marco ;
Zirlik, Andreas .
CIRCULATION, 2017, 135 (25) :2524-2533