Deep sequencing reveals complex mechanisms of microRNA regulation during retinoic acid-induced neuronal differentiation of mesenchymal stem cells

被引:7
作者
Hu, Feihu [1 ,2 ]
Xu, Peng [1 ]
Sun, Bo [1 ]
Teng, Gaojun [2 ,3 ]
Xiao, Zhongdang [1 ]
机构
[1] Southeast Univ, Sch Biol Sci & Med Engn, State Key Lab Bioelect, Nanjing, Jiangsu, Peoples R China
[2] Southeast Univ, Sch Med, Nanjing, Jiangsu, Peoples R China
[3] Southeast Univ, Zhongda Hosp, Dept Radiol, Jiangsu Key Lab Mol & Funct Imaging, Nanjing, Jiangsu, Peoples R China
基金
中国国家自然科学基金;
关键词
Retinoic acid-induced neuronal differentiation; High-throughput deep sequencing; MiRNA expression profiles; Regulation network; HUMAN ADIPOSE-TISSUE; FIBROBLAST-GROWTH-FACTOR; NEURAL DIFFERENTIATION; EXPRESSION; PROLIFERATION; FATE; CYTOTOXICITY; FOXO1;
D O I
10.1016/j.ygeno.2017.05.004
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Retinoic acid (RA) has an important role in nervous system development; exogenous RA could induce stem cells towards neural lineage cells. However, the miRNA regulation mechanism and biological process of this induction require further exploration. In this study, using high-throughput sequencing results, we evaluated the microRNA profiles of neurally differentiated adipose-derived mesenchymal stem cells (ASCs), summarized several crucial microRNAs that profoundly contributed to the differentiation process, and speculated that several miRNAs were likely to mimic RA or other factors to induce the neuronal differentiation of stem cells. The GO terms and KEGG PATHWAY in the DAVID tool were used to elucidate the biological process of RA induction. Finally, we described a network for clarifying the relationship among the miRNAs, target genes and signaling pathways. These findings will be beneficial for understanding the induction mechanism and supporting the application of RA in stem cell transformation. (C) 2017 Published by Elsevier Inc.
引用
收藏
页码:302 / 311
页数:10
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