modlAMP: Python']Python for antimicrobial peptides

被引：114

作者：

Mueller, Alex T. ^{[1
]}

Gabernet, Gisela ^{[1
]}

Hiss, Jan A. ^{[1
]}

Schneider, Gisbert ^{[1
]}

机构：

[1] Swiss Fed Inst Technol, Dept Chem & Appl Biosci, CH-8093 Zurich, Switzerland

来源：

BIOINFORMATICS | 2017年 / 33卷 / 17期

基金：

瑞士国家科学基金会;

关键词：

AMINO-ACIDS; DESIGN; TRANSMEMBRANE; DESCRIPTORS; PREDICTION; PROTEINS; TOOLS; QSAR;

D O I：

10.1093/bioinformatics/btx285

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

A Summary: We have implemented the molecular design laboratory's antimicrobial peptides package (modlAMP), a Python-based software package for the design, classification and visual representation of peptide data. modlAMP offers functions for molecular descriptor calculation and the retrieval of amino acid sequences from public or local sequence databases, and provides instant access to precompiled datasets for machine learning. The package also contains methods for the analysis and representation of circular dichroism spectra.

引用

页码：2753 / 2755

页数：3

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