Nucleotide Analogues Bearing a C2′ or C3′-Stereogenic All-Carbon Quaternary Center as SARS-CoV-2 RdRp Inhibitors

被引:5
作者
Manchoju, Amarender [1 ]
Zelli, Renaud [1 ]
Wang, Gang [1 ]
Eymard, Carla [1 ]
Oo, Adrian [2 ]
Nemer, Mona [3 ]
Prevost, Michel [1 ]
Kim, Baek [2 ,4 ]
Guindon, Yvan [1 ,3 ,5 ]
机构
[1] Inst Recherches Clin Montreal, Bioorgan Chem Lab, Montreal, PQ H2W 1R7, Canada
[2] Emory Univ, Sch Med, Dept Pediat, Atlanta, GA 30322 USA
[3] Univ Ottawa, Dept Biochem Microbiol & Immunol, Ottawa, ON K1N 6N5, Canada
[4] Childrens Hlthcare Atlanta, Atlanta, GA 30322 USA
[5] Univ Montreal, Dept Chem, Montreal, PQ H3C 3J7, Canada
基金
加拿大自然科学与工程研究理事会; 加拿大健康研究院;
关键词
SARS-CoV-2; COVID-19; RdRp; quaternary stereocenter; nucleoside analogues; epoxidation; glycosylation; triphosphorylation; NUCLEOSIDE; EPOXIDATION; DISCOVERY; ADDITIONS;
D O I
10.3390/molecules27020564
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The design of novel nucleoside triphosphate (NTP) analogues bearing an all-carbon quaternary center at C2 ' or C3 ' is described. The construction of this all-carbon stereogenic center involves the use of an intramoleculer photoredox-catalyzed reaction. The nucleoside analogues (NA) hydroxyl functional group at C2 ' was generated by diastereoselective epoxidation. In addition, highly enantioselective and diastereoselective Mukaiyama aldol reactions, diastereoselective N-glycosylations and regioselective triphosphorylation reactions were employed to synthesize the novel NTPs. Two of these compounds are inhibitors of the RNA-dependent RNA polymerase (RdRp) of SARS-CoV-2, the causal virus of COVID-19.
引用
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页数:25
相关论文
共 33 条
[1]   EPOXIDATION OF ALKENES BY DIMETHYLDIOXIRANE - EVIDENCE FOR A SPIRO TRANSITION-STATE [J].
BAUMSTARK, AL ;
MCCLOSKEY, CJ .
TETRAHEDRON LETTERS, 1987, 28 (29) :3311-3314
[2]   Photoredox-Catalyzed Stereoselective Radical Reactions to Synthesize Nucleoside Analogues with a C2′-Stereogenic All-Carbon Quaternary Center [J].
Becerril-Jimenez, Fabiola ;
Lussier, Tommy ;
Leblanc, Louis ;
Eymard, Carla ;
Dostie, Starr ;
Prevost, Michel ;
Guindon, Yvan .
JOURNAL OF ORGANIC CHEMISTRY, 2019, 84 (22) :14795-14804
[3]   Syntheses of nucleoside triphosphates [J].
Burgess, K ;
Cook, D .
CHEMICAL REVIEWS, 2000, 100 (06) :2047-2059
[4]   Protection-Free One-Pot Synthesis of 2′-Deoxynucleoside 5′-Triphosphates and DNA Polymerization [J].
Caton-Williams, Julianne ;
Smith, Matthew ;
Carrasco, Nicolas ;
Huang, Zhen .
ORGANIC LETTERS, 2011, 13 (16) :4156-4159
[5]   Direct epoxidation of D-glucal and D-galactal derivatives with in situ generated DMDO [J].
Cheshev, Pavel ;
Marra, Alberto ;
Dondoni, Alessandro .
CARBOHYDRATE RESEARCH, 2006, 341 (16) :2714-2716
[6]  
Chien MC, 2020, J PROTEOME RES, V19, P4690, DOI [10.1101/2020.03.18.997585, 10.1021/acs.jproteome.0c00392]
[7]   STEREOSPECIFIC VORBRUGGEN-LIKE REACTIONS OF 1,2-ANHYDRO SUGARS - AN ALTERNATIVE ROUTE TO THE SYNTHESIS OF NUCLEOSIDES [J].
CHOW, K ;
DANISHEFSKY, S .
JOURNAL OF ORGANIC CHEMISTRY, 1990, 55 (13) :4211-4214
[8]   Diastereoselective Synthesis of C2′-Fluorinated Nucleoside Analogues Using an Acyclic Approach [J].
Dostie, Starr ;
Prevost, Michel ;
Mochirian, Philippe ;
Tanveer, Kashif ;
Andrella, Nicholas ;
Rostami, Ariana ;
Tambutet, Guillaume ;
Guindon, Yvan .
JOURNAL OF ORGANIC CHEMISTRY, 2016, 81 (22) :10769-10790
[9]   Structure of the RNA-dependent RNA polymerase from COVID-19 virus [J].
Gao, Yan ;
Yan, Liming ;
Huang, Yucen ;
Liu, Fengjiang ;
Zhao, Yao ;
Cao, Lin ;
Wang, Tao ;
Sun, Qianqian ;
Ming, Zhenhua ;
Zhang, Lianqi ;
Ge, Ji ;
Zheng, Litao ;
Zhang, Ying ;
Wang, Haofeng ;
Zhu, Yan ;
Zhu, Chen ;
Hu, Tianyu ;
Hua, Tian ;
Zhang, Bing ;
Yang, Xiuna ;
Li, Jun ;
Yang, Haitao ;
Liu, Zhijie ;
Xu, Wenqing ;
Guddat, Luke W. ;
Wang, Quan ;
Lou, Zhiyong ;
Rao, Zihe .
SCIENCE, 2020, 368 (6492) :779-+
[10]   Diastereoselective Hydrogen-Transfer Reactions: An Experimental and DFT Study [J].
Godin, Francois ;
Prevost, Michel ;
Gorelsky, Serge I. ;
Mochirian, Philippe ;
Maud Nguyen ;
Viens, Frederick ;
Guindon, Yvan .
CHEMISTRY-A EUROPEAN JOURNAL, 2013, 19 (28) :9308-9318