Anisotropic Electrostatic Interactions in Coarse-Grained Water Models to Enhance the Accuracy and Speed-Up Factor of Mesoscopic Simulations

被引:9
|
作者
Bellussi, Francesco Maria [1 ]
Roscioni, Otello Maria [2 ]
Ricci, Matteo [2 ]
Fasano, Matteo [1 ]
机构
[1] Politecn Torino, Dept Energy, I-10129 Turin, Italy
[2] MaterialX LTD, Bristol BS2 0XJ, Avon, England
来源
JOURNAL OF PHYSICAL CHEMISTRY B | 2021年 / 125卷 / 43期
关键词
MOLECULAR-DYNAMICS SIMULATIONS; DIFFUSION-COEFFICIENTS; SYSTEM; ALGORITHM; EQUATIONS; VISCOSITY; BULK;
D O I
10.1021/acs.jpcb.1c07642
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Water models with realistic physical-chemical properties are essential to study a variety of biomedical processes or engineering technologies involving molecules or nanomaterials. Atomistic models of water are constrained by the feasible computational capacity, but calibrated coarse-grained (CG) ones can go beyond these limits. Here, we compare three popular atomistic water models with their corresponding CG model built using finite-size particles such as ellipsoids. Differently from previous approaches, short-range interactions are accounted for with the generalized Gay-Berne potential, while electrostatic and long-range interactions are computed from virtual charges inside the ellipsoids. Such an approach leads to a quantitative agreement between the original atomistic models and their CG counterparts. Results show that a timestep of up to 10 fs can be achieved to integrate the equations of motion without significant degradation of the physical observables extracted from the computed trajectories, thus unlocking a significant acceleration of water-based mesoscopic simulations at a given accuracy.
引用
收藏
页码:12020 / 12027
页数:8
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