Cryoelectron microscopy structures of the ribosome complex in intermediate states during tRNA translocation

被引:32
作者
Fu, Jie
Munro, James B. [2 ]
Blanchard, Scott C. [2 ]
Frank, Joachim [1 ,3 ]
机构
[1] Columbia Univ, Dept Biochem & Mol Biophys, Howard Hughes Med Inst, New York, NY 10032 USA
[2] Weill Cornell Med Coll, Dept Physiol & Biophys, New York, NY 10065 USA
[3] Columbia Univ, Dept Biol Sci, New York, NY 10027 USA
基金
美国国家卫生研究院;
关键词
MESSENGER-RNA; HYBRID STATE; SINGLE-PARTICLE; L1; STALK; DYNAMICS; MOVEMENT; BINDING; SPACE; RECONSTRUCTION; CONFORMATION;
D O I
10.1073/pnas.1101503108
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
mRNA-tRNA translocation is a central and highly regulated process during translational elongation. Along with the mRNA, tRNA moves through the ribosome in a stepwise fashion. Using cryoelectron microscopy on ribosomes with a P-loop mutation, we have identified novel structural intermediates likely to exist transiently during translocation. Our observations suggest a mechanism by which the rate of translocation can be regulated.
引用
收藏
页码:4817 / 4821
页数:5
相关论文
共 34 条
[1]   Visualization of the Hybrid State of tRNA Binding Promoted by Spontaneous Ratcheting of the Ribosome [J].
Agirrezabala, Xabier ;
Lei, Jianlin ;
Brunelle, Julie L. ;
Ortiz-Meoz, Rodrigo F. ;
Green, Rachel ;
Frank, Joachim .
MOLECULAR CELL, 2008, 32 (02) :190-197
[2]   A unique conformation of the anticodon stem-loop is associated with the capacity of tRNAfMet to initiate protein synthesis [J].
Barraud, Pierre ;
Schmitt, Emmanuelle ;
Mechulam, Yves ;
Dardel, Frederic ;
Tisne, Carine .
NUCLEIC ACIDS RESEARCH, 2008, 36 (15) :4894-4901
[3]   Structural basis for mRNA and tRNA positioning on the ribosome [J].
Berk, Veysel ;
Zhang, Wen ;
Pai, Raj D. ;
Cate, Jamie H. Doudna .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (43) :15830-15834
[4]   tRNA dynamics on the ribosome during translation [J].
Blanchard, SC ;
Kim, HD ;
Gonzalez, RL ;
Puglisi, JD ;
Chu, S .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (35) :12893-12898
[5]   Single-molecule observations of ribosome function [J].
Blanchard, Scott C. .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 2009, 19 (01) :103-109
[6]   RESTRAINED REAL-SPACE MACROMOLECULAR ATOMIC REFINEMENT USING A NEW RESOLUTION-DEPENDENT ELECTRON-DENSITY FUNCTION [J].
CHAPMAN, MS .
ACTA CRYSTALLOGRAPHICA SECTION A, 1995, 51 :69-80
[7]   Spontaneous intersubunit rotation in single ribosomes [J].
Cornish, Peter V. ;
Ermolenko, Drnitri N. ;
Noller, Harry F. ;
Ha, Taekjip .
MOLECULAR CELL, 2008, 30 (05) :578-588
[8]   The hybrid state of tRNA binding is an authentic translation elongation intermediate [J].
Dorner, S ;
Brunelle, JL ;
Sharma, D ;
Green, R .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2006, 13 (03) :234-241
[9]   Ribosome Structure and Dynamics During Translocation and Termination [J].
Dunkle, Jack A. ;
Cate, Jamie H. D. .
ANNUAL REVIEW OF BIOPHYSICS, VOL 39, 2010, 39 :227-244
[10]   Observation of intersubunit movement of the ribosome in solution using FRET [J].
Ermolenko, Dmitri N. ;
Majumdar, Zigurts K. ;
Hickerson, Robyn P. ;
Spiegel, P. Clint ;
Clegg, Robert M. ;
Noller, Harry F. .
JOURNAL OF MOLECULAR BIOLOGY, 2007, 370 (03) :530-540