Discrimination of Panax ginseng from counterfeits using single nucleotide polymorphism: A focused review

被引:14
作者
Ying, Zheng [1 ]
Awais, Muhammad [2 ]
Akter, Reshmi [2 ]
Xu, Fengjiao [2 ]
Baik, Sul [2 ]
Jung, Daehyo [2 ]
Yang, Deok Chun [2 ]
Kwak, Gi-Young [2 ]
You, Wenying [1 ]
机构
[1] Weifang Engn Vocat Coll, Qingzhou, Peoples R China
[2] Kyung Hee Univ, Coll Life Sci, Grad Sch Biotechnol, Yongin, South Korea
关键词
single nucleotide polymorphism; saponins; landraces; cultivars; markers; INTERNAL TRANSCRIBED SPACER; MOLECULAR AUTHENTICATION; CULTIVAR CHUNPOONG; SNP MARKERS; IDENTIFICATION; MEYER; GENE; AMPLIFICATION; QUINQUEFOLIUS; GUMPOONG;
D O I
10.3389/fpls.2022.903306
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Discrimination of plant species, cultivars, and landraces is challenging because plants have high phenotypic and genotypic resemblance. Panax ginseng is commonly referred to as Korean ginseng, which contains saponins with high efficacy on cells, and has been reported to be worth billions in agroeconomic value. Korean ginseng's increasing global agroeconomic value includes additional species and cultivars that are not Korean ginseng but have physical characteristics close to it. This almost unidentifiable physical characteristic of Korean ginseng-like species is discriminated via molecular markers. Single nucleotide polymorphism (SNP), found across the plant species in abundance, is a valuable tool in the molecular mapping of genes and distinguishing a plant species from adulterants. Differentiating the composition of genes in species is quite evident, but the varieties and landraces have fewer differences in addition to single nucleotide mismatch. Especially in the exon region, there exist both favorable and adverse effects on species. With the aforementioned ideas in discriminating ginseng based on molecular markers, SNP has proven reliable and convenient, with advanced markers available. This article provides the simplest cost-effective guidelines for experiments in a traditional laboratory setting to get hands-on SNP marker analysis. Hence, the current review provides detailed up-to-date information about the discrimination of Panax ginseng exclusively based on SNP adding with a straightforward method explained which can be followed to perform the analysis.
引用
收藏
页数:16
相关论文
共 57 条
[1]   A modified protocol for rapid DNA isolation from plant tissues using cetyltrimethylammonium bromide [J].
Allen, G. C. ;
Flores-Vergara, M. A. ;
Krasnyanski, S. ;
Kumar, S. ;
Thompson, W. F. .
NATURE PROTOCOLS, 2006, 1 (05) :2320-2325
[2]   The world ginseng market and the ginseng (Korea) [J].
Baeg, In-Ho ;
So, Seung-Ho .
JOURNAL OF GINSENG RESEARCH, 2013, 37 (01) :1-7
[3]  
Bang Kyong-Hwan, 2011, [KOREAN JOURNAL OF MEDICINAL CROP SCIENCE, 한국약용작물학회지], V19, P185
[4]   OBITOOLS: a UNIX-inspired software package for DNA metabarcoding [J].
Boyer, Frederic ;
Mercier, Celine ;
Bonin, Aurelie ;
Le Bras, Yvan ;
Taberlet, Pierre ;
Coissac, Eric .
MOLECULAR ECOLOGY RESOURCES, 2016, 16 (01) :176-182
[5]   Comparative analysis of nuclear, chloroplast, and mitochondrial genomes of watermelon and melon provides evidence of gene transfer [J].
Cui, Haonan ;
Ding, Zhuo ;
Zhu, Qianglong ;
Wu, Yue ;
Qiu, Boyan ;
Gao, Peng .
SCIENTIFIC REPORTS, 2021, 11 (01)
[6]   Study of the efficacy of Korean Red Ginseng in the treatment of erectile dysfunction [J].
de Andrade, Enrico ;
de Mesquita, Alexandre A. ;
Claro, Joaquim de Almeida ;
de Andrade, Priscila M. ;
Ortiz, Valdemar ;
Paranhos, Mario ;
Srougi, Miguel .
ASIAN JOURNAL OF ANDROLOGY, 2007, 9 (02) :241-244
[7]   Sequencing Angiosperm Plastid Genomes Made Easy: A Complete Set of Universal Primers and a Case Study on the Phylogeny of Saxifragales [J].
Dong, Wenpan ;
Xu, Chao ;
Cheng, Tao ;
Lin, Kui ;
Zhou, Shiliang .
GENOME BIOLOGY AND EVOLUTION, 2013, 5 (05) :989-997
[8]  
Doyle JJ., 1987, Phytochem Bull, V19, P11, DOI DOI 10.2307/2419362
[9]   Molecular authentication of the traditional Chinese medicinal plant Angelica sinensis based on internal transcribed spacer of nrDNA [J].
Feng, Tu ;
Liu, Shuang ;
He, Xing-jin .
ELECTRONIC JOURNAL OF BIOTECHNOLOGY, 2010, 13 (01)
[10]   Review: Molecular techniques to assess genetic variation within and between Panax ginseng and Panax quinquefolius [J].
Goodwin, P. H. ;
Proctor, E. .
FITOTERAPIA, 2019, 138