Stereochemistry of sagittamide a from residual dipolar coupling enhanced NMR

被引:90
作者
Schuetz, Anne
Junker, Jochen
Leonov, Andrei
Lange, Oliver F.
Molinski, Tadeusz F.
Griesinger, Christian
机构
[1] Max Planck Inst Biophys Chem, Dept NMR Based Struct Biol, D-37077 Gottingen, Germany
[2] Univ Washington, Dept Biochem, Seattle, WA 98195 USA
[3] Univ Calif San Diego, Skaggs Sch Pharm & Pharmacal Sci, Dept Chem & Biochem, La Jolla, CA 92093 USA
关键词
D O I
10.1021/ja075876l
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Sagittamide A is a long-chain acyclic M,CO-dicarboxylic acid with eight stereocenters, The central hexahydroxyhexane moiety carries six of them. For this moiety, two different relative stereochemical assignments were published in 2006. In this communication, one relative configuration is clearly singled out based on NOEs, J - and residual dipolar couplings despite conformational averaging that is present in this moiety. The proposed NMR method relies on the measurement of dipolar couplings in recently introduced alignment media that are compatible with organic solvents, and cross validating the NMR determined ensemble of conformations against the residual dipolar couplings. The method is easily applicable to many other stereochemical problems.
引用
收藏
页码:15114 / +
页数:3
相关论文
共 17 条
[1]   Validation of protein structure from anisotropic carbonyl chemical shifts in a dilute liquid crystalline phase [J].
Cornilescu, G ;
Marquardt, JL ;
Ottiger, M ;
Bax, A .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1998, 120 (27) :6836-6837
[2]   Stretched poly(vinyl acetate) gels as NMR alignment media for the measurement of residual dipolar couplings in polar organic solvents [J].
Freudenberger, JC ;
Knör, S ;
Kobzar, K ;
Heckmann, D ;
Paululat, T ;
Kessler, H ;
Luy, B .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2005, 44 (03) :423-426
[3]   A DMSO-compatible orienting medium: Towards the investigation of the stereochemistry of natural products [J].
Haberz, P ;
Farjon, J ;
Griesinger, C .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2005, 44 (03) :427-429
[4]   Universal NMR databases for contiguous polyols [J].
Higashibayashi, S ;
Czechtizky, W ;
Kobayashi, Y ;
Kishi, Y .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2003, 125 (47) :14379-14393
[5]   HECADE: HMQC- and HSQC-based 2D NMR experiments for accurate and sensitive determination of heteronuclear coupling constants from TOCSY-type cross peaks [J].
Kozminski, W ;
Nanz, D .
JOURNAL OF MAGNETIC RESONANCE, 1997, 124 (02) :383-392
[6]   Stretched poly(acrylonitrile) as a scalable alignment medium for DMSO [J].
Kummerloewe, Grit ;
Auernheimer, Joerg ;
Lendlein, Andreas ;
Luy, Burkhard .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2007, 129 (19) :6080-+
[7]   Progressive-convergent elucidation of stereochemistry in complex polyols. The absolute configuration of (-)-sagittamide A [J].
Lievens, Sarah C. ;
Molinski, Tadeusz F. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2006, 128 (36) :11764-11765
[8]   Sagittamides A and B. Polyacetoxy long-chain acyl amino acids from a didemnid ascidian [J].
Lievens, SC ;
Molinski, TF .
ORGANIC LETTERS, 2005, 7 (11) :2281-2284
[9]   Stereochemical determination of acyclic structures based on carbon-proton spin-coupling constants. A method of configuration analysis for natural products [J].
Matsumori, N ;
Kaneno, D ;
Murata, M ;
Nakamura, H ;
Tachibana, K .
JOURNAL OF ORGANIC CHEMISTRY, 1999, 64 (03) :866-876
[10]   Total synthesis of (-)-ulapualide A: The danger of overdependence on NMR spectroscopy in assignment of stereochemistry [J].
Pattenden, Gerald ;
Ashweek, Neil J. ;
Baker-Glenn, Charles A. G. ;
Walker, Gary M. ;
Yee, James G. K. .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2007, 46 (23) :4359-4363