Salinarimonas soli sp. nov., isolated from soil

被引:2
|
作者
Jin, Chun-Zhi [1 ,2 ]
Jin, Long [1 ]
Liu, Min-Jiao [2 ]
Kang, Min-Kyoung [2 ]
Park, So Hee [2 ]
Park, Dong-Jin [2 ]
Kim, Chang- Jin [2 ]
机构
[1] Nanjing Forestry Univ, Coll Biol & Environm, Co Innovat Ctr Sustainable Forestry Southern Chin, Nanjing 210037, Peoples R China
[2] Korea Res Inst Biosci & Biotechnol KRIBB, Ind Biomat Res Ctr, 125 Gwahak ro, Daejeon 305806, South Korea
关键词
BN140002(T); Salinarimonas; Salinarimonas soli; soil; AEROBIC PHOTOTROPHIC BACTERIA; ERYTHROMONAS-URSINCOLA; SEQUENCE ALIGNMENT; SANDARACINOBACTER; ERYTHROMICROBIUM; PHYLOGENY; DATABASE;
D O I
10.1099/ijsem.0.005095
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A light pink coloured bacterium, designated strain BN140002(T), was isolated from a soil sample collected in Goesan-gun, Chungcheongbuk-do, Republic of Korea. Cells of strain BN140002(T) were Gram-stain-negative, aerobic, motile and rod-shaped. Phylogenetic analysis based on 16S rRNA gene sequences showed 94.7, 94.7, 93.9, 93.3, 93.4 and 93.0% similarities to Salinarimonas rosea KCTC 22346(T), Salinarimonas ramus DSM 22962(T), Saliniramus fredricksonii HL-109(T), Microvirga soli R491(T), Chelatococcus caeni EBR-4-1(T) and Chelatococcus composti PC-2(T), respectively. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylcholine and phosphatidylethanolamine. The major cellular fatty acids were summed feature 8 (C-18:1 omega 7c and/or C-18:1 omega 6c) and summed feature 1 (C-12:0 aldehyde and/or unknown 10.98) and the predominant ubiquinone was Q-10. The genomic DNA G+C content of strain BN140002(T) was 70.1 mol%. The genomic orthoANI values between strain BN140002T and Salinarimonas rosea KCTC 22346(T) and Salinarimonas ramus DSM 22962T were 75.0 and 74.8 %, respectively. Strain BN140002(T) had a class I-C type CRISPR-Cas system (CRISPR-associated helicase Cas3, CRISPR-associated protein Cas8c, CRISPR-associated protein Cas7, CRISPR-associated RecB family exonuclease Cas4, CRISPR-associated protein 1, 2). Based on phenotypic, chemotaxonomic and phylogenetic data, strain BN140002(T) should be assigned as a novel species of the genus Salinarimonas , for which the name Salinarimonas soli sp. nov. is proposed. The type strain is BN140002(T) (=KCTC 42643(T)=CCTCC AB 2017173(T)).
引用
收藏
页数:9
相关论文
共 50 条
  • [21] Pigmentiphaga soli sp. nov., a bacterium isolated from soil
    Jae-Jin Lee
    Sathiyaraj Srinivasan
    Myung Kyum Kim
    The Journal of Microbiology, 2011, 49 : 857 - 861
  • [22] Runella soli sp. nov., isolated from garden soil
    Chhetri, Geeta
    Kim, Jiyoun
    Kim, Inhyup
    Kim, Myung Kyum
    Seo, Taegun
    ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2019, 112 (08): : 1245 - 1252
  • [23] Steroidobacter soli sp. nov., isolated from farmland soil
    Huang, Jun-Wei
    Hu, Shun-Li
    Cheng, Xiao-Kun
    Chen, Dian
    Kong, Xiang-Kun
    Jiang, Jian-Dong
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2019, 69 (11) : 3443 - 3447
  • [24] Salinibacterium soli sp. nov., isolated from lakeside soil
    Wan, Yingying
    Xiong, Miaohuan
    Zhu, Lingfeng
    Ni, Haiyan
    Chen, Xuelan
    Liu, Bin
    He, Jian
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2024, 74 (07)
  • [25] Qipengyuania soli sp. nov., Isolated from Mangrove Soil
    Yang Liu
    Tao Pei
    Ming-Rong Deng
    Honghui Zhu
    Current Microbiology, 2021, 78 : 2806 - 2814
  • [26] Arachidicoccus soli sp. nov., a bacterium isolated from soil
    Lee, Shin Ae
    Kim, Tae-Wan
    Sang, Mee-Kyung
    Song, Jaekyeong
    Kwon, Soon-Wo
    Weon, Hang-Yeon
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2021, 71 (01) : 1 - 6
  • [27] Sinomicrobium soli sp. nov., isolated from arctic soil
    Liu, Xiupian
    Lai, Qiliang
    Du, Yaping
    Zhang, Xiaorong
    Zhong, Huanzi
    Shao, Zongze
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2019, 69 (04) : 1070 - 1074
  • [28] Runella soli sp. nov., isolated from garden soil
    Geeta Chhetri
    Jiyoun Kim
    Inhyup Kim
    Myung Kyum Kim
    Taegun Seo
    Antonie van Leeuwenhoek, 2019, 112 : 1245 - 1252
  • [29] Planococcus soli sp. nov., isolated from antarctic soil
    Siyue Zhang
    Weiwei Ping
    Yuhua Xin
    Di Xin
    Jianli Zhang
    Antonie van Leeuwenhoek, 2021, 114 : 1107 - 1115
  • [30] Paraherbaspirillum soli gen. nov., sp. nov. isolated from soil
    Rangasamy Anandham
    Soo-Jin Kim
    Ji Young Moon
    Hang-Yeon Weon
    Soon-Wo Kwon
    Journal of Microbiology, 2013, 51 : 262 - 267