Global Distribution of Polaromonas Phylotypes - Evidence for a Highly Successful Dispersal Capacity

被引:124
作者
Darcy, John L. [1 ]
Lynch, Ryan C. [1 ]
King, Andrew J. [1 ]
Robeson, Michael S. [1 ]
Schmidt, Steven K. [1 ]
机构
[1] Univ Colorado, Dept Ecol & Evolutionary Biol, Boulder, CO 80309 USA
基金
美国国家科学基金会;
关键词
COMMUNITY COMPOSITIONS; RAST SERVER; BIOGEOGRAPHY; DIVERSITY; BACTERIA; ICE; ELEVATION; INFERENCE; EVOLUTION; SEQUENCE;
D O I
10.1371/journal.pone.0023742
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Bacteria from the genus Polaromonas are dominant phylotypes in clone libraries and culture collections from polar and high-elevation environments. Although Polaromonas has been found on six continents, we do not know if the same phylotypes exist in all locations or if they exhibit genetic isolation by distance patterns. To examine their biogeographic distribution, we analyzed all available, long-read 16S rRNA gene sequences of Polaromonas phylotypes from glacial and periglacial environments across the globe. Using genetic isolation by geographic distance analyses, including Mantel tests and Mantel correlograms, we found that Polaromonas phylotypes are globally distributed showing weak isolation by distance patterns at global scales. More focused analyses using discrete, equally sampled distances classes, revealed that only two distance classes (out of 12 total) showed significant spatial structuring. Overall, our analyses show that most Polaromonas phylotypes are truly globally distributed, but that some, as yet unknown, environmental variable may be selecting for unique phylotypes at a minority of our global sites. Analyses of aerobiological and genomic data suggest that Polaromonas phylotypes are globally distributed as dormant cells through high-elevation air currents; Polaromonas phylotypes are common in air and snow samples from high altitudes, and a glacial-ice metagenome and the two sequenced Polaromonas genomes contain the gene hipA, suggesting that Polaromonas can form dormant cells.
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页数:7
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