Reciprocal regulation between alternative splicing and the DNA damage response

被引:0
作者
Cambindo Botto, Adrian E. [1 ]
Munoz, Juan C. [1 ]
Giono, Luciana E. [1 ]
Nieto-Moreno, Nicolas [1 ]
Cuenca, Carmen [1 ]
Kornblihtt, Alberto R. [1 ]
Munoz, Manuel J. [1 ,2 ,3 ]
机构
[1] Univ Buenos Aires, Fac Ciencias Exactas & Nat, Dept Fisiol Biol Mol & Celular, Inst Fisiol Biol Mol & Neurociencias IFIBYNE,CONI, Buenos Aires, DF, Argentina
[2] Fdn Ist FIRC Oncol Mol IFOM, Milan, Italy
[3] Univ Buenos Aires, Fac Ciencias Exactas & Nat, Dept Biodiversidad & Biol Expt, Buenos Aires, DF, Argentina
关键词
DNA damage; alternative splicing; ATR; ATM; DNA-PK; PYRIMIDINE DIMERS; RNA; TRANSCRIPTION; REPAIR; PHOSPHORYLATION; RECRUITMENT; SUBUNIT; SPLICEOSOME; INHIBITION; EXPRESSION;
D O I
10.1590/1678-4685-GMB-2019-0111
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Splicing, the process that catalyzes intron removal and flanking exon ligation, can occur in different ways (alternative splicing) in immature RNAs transcribed from a single gene. In order to adapt to a particular context, cells modulate not only the quantity but also the quality (alternative isoforms) of their transcriptome. Since 95 0 /0 of the human coding genome is subjected to alternative splicing regulation, it is expected that many cellular pathways are modulated by alternative splicing, as is the case for the DNA damage response. Moreover, recent evidence demonstrates that upon a genotoxic insult, classical DNA damage response kinases such as ATM, ATR and DNA-PK orchestrate the gene expression response therefore modulating alternative splicing which, in a reciprocal way, shapes the response to a damaging agent.
引用
收藏
页码:1 / 6
页数:6
相关论文
共 45 条
[1]   Coupling between nucleotide excision repair and gene expression [J].
Adrian E, Cambindo Botto ;
Munoz, Juan C. ;
Munoz, Manuel J. .
RNA BIOLOGY, 2018, 15 (07) :845-848
[2]   Total RNA sequencing reveals nascent transcription and widespread co-transcriptional splicing in the human brain [J].
Ameur, Adam ;
Zaghlool, Ammar ;
Halvardson, Jonatan ;
Wetterbom, Anna ;
Gyllensten, Ulf ;
Cavelier, Lucia ;
Feuk, Lars .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2011, 18 (12) :1435-U157
[3]   Differential recruitment of nuclear receptor coactivators may determine alternative RNA splice site choice in target genes [J].
Auboeuf, D ;
Dowhan, DH ;
Kang, YK ;
Larkin, K ;
Lee, JW ;
Berget, SM ;
O'Malley, BW .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (08) :2270-2274
[4]   ATM and ATR signaling at a glance [J].
Awasthi, Poorwa ;
Foiani, Marco ;
Kumar, Amit .
JOURNAL OF CELL SCIENCE, 2015, 128 (23) :4255-4262
[5]   Phosphorylation of human CDC25B phosphatase by CDK1-cyclin A triggers its proteasome-dependent degradation [J].
Baldin, V ;
Cans, C ;
Knibiehler, M ;
Ducommun, B .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1997, 272 (52) :32731-32734
[6]   Deciphering the splicing code [J].
Barash, Yoseph ;
Calarco, John A. ;
Gao, Weijun ;
Pan, Qun ;
Wang, Xinchen ;
Shai, Ofer ;
Blencowe, Benjamin J. ;
Frey, Brendan J. .
NATURE, 2010, 465 (7294) :53-59
[7]   The human SWI/SNF subunit Brm is a regulator of alternative splicing [J].
Batsché, E ;
Yaniv, M ;
Muchardt, C .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2006, 13 (01) :22-29
[8]   Chk2 splice variants express a dominant-negative effect on the wild-type Chk2 kinase activity [J].
Berge, Elisabet Ognedal ;
Staalesen, Vidar ;
Straume, Anne Hege ;
Lillehaug, Johan Richard ;
Lonning, Per Eystein .
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH, 2010, 1803 (03) :386-395
[9]   The Replication Checkpoint Protects Fork Stability by Releasing Transcribed Genes from Nuclear Pores [J].
Bermejo, Rodrigo ;
Capra, Thelma ;
Jossen, Rachel ;
Colosio, Arianna ;
Frattini, Camilla ;
Carotenuto, Walter ;
Cocito, Andrea ;
Doksani, Ylli ;
Klein, Hannah ;
Gomez-Gonzalez, Belen ;
Aguilera, Andres ;
Katou, Yuki ;
Shirahige, Katsuhiko ;
Foiani, Marco .
CELL, 2011, 146 (02) :233-246
[10]   A UNIQUE STRUCTURE AT THE CARBOXYL TERMINUS OF THE LARGEST SUBUNIT OF EUKARYOTIC RNA POLYMERASE-II [J].
CORDEN, JL ;
CADENA, DL ;
AHEARN, JM ;
DAHMUS, ME .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1985, 82 (23) :7934-7938