Complete Genome Sequence Resource for the Necrotrophic Plant-Pathogenic Bacterium Dickeya dianthicola 67-19 Isolated From New Guinea Impatiens

被引：6
作者：
Liu, Yingyu [1 ]
Helmann, Tyler C. [2 ]
Stodghill, Paul [1 ,2 ]
Filiatrault, Melanie J. [1 ,2 ]
机构：
[1] Cornell Univ, Sch Integrat Plant Sci, Sect Plant Pathol & Plant Microbe Biol, Ithaca, NY 14853 USA
[2] ARS, Emerging Pests & Pathogens Res Unit, Robert W Holley Ctr Agr & Hlth, USDA, Ithaca, NY 14853 USA
来源：
PLANT DISEASE | 2021年 / 105卷 / 04期
关键词：
Dickeya dianthicola; New Guinea impatiens; whole genome sequence; de novo assembly; 1ST REPORT; SOFT-ROT; BLACKLEG; POTATO; NOV;
D O I：
10.1094/PDIS-09-20-1968-A
中图分类号：
Q94 [植物学];
学科分类号：
071001 ;
摘要：
New Guinea impatiens (NGI, Impatiens hawkeri) are popular bedding plants that can be affected by a number of pathogens. Using 16S rDNA sequencing and genus-specific PCR, we identified the first Dickeya dianthicola strain isolated from NGI presented with blackleg symptoms, herein designated as D. dianthicola 67-19. Here, we report a high-quality complete and annotated genome sequence of D. dianthicola 67-19. The 4,851,809 bp genome was assembled with Nanopore reads and polished with Illumina reads, yielding 422x and 105x coverage, respectively. This closed genome provides a resource for future research on comparative genomics and biology of D. dianthicola, which could translate to improved detection and disease management.
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收藏
页码：1174 / 1176
页数：3
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