The peach genome

被引:111
作者
Arus, Pere [1 ]
Verde, Ignazio [2 ]
Sosinski, Bryon [3 ]
Zhebentyayeva, Tatyana [4 ]
Abbott, Albert G. [4 ]
机构
[1] UB, UAB, IRTA, Ctr Recerca Agrigen,CSIC, Barcelona 08193, Spain
[2] Fruit Tree Res Ctr, CRA, I-00134 Rome, Italy
[3] N Carolina State Univ, Dept Hort Sci, Raleigh, NC 27695 USA
[4] Clemson Univ, Dept Biochem & Genet, Clemson, SC 29634 USA
关键词
Prunus; Genomics; Breeding; Map; Sequence; GENETIC-LINKAGE MAP; PLUM-POX-VIRUS; POWDERY MILDEW RESISTANCE; PRUNUS-PERSICA; PROTEOMIC ANALYSIS; CANDIDATE GENES; PHYSICAL MAP; CHILLING REQUIREMENT; SYNTENY CONSERVATION; ROSACEAE GENOMICS;
D O I
10.1007/s11295-012-0493-8
中图分类号
S7 [林业];
学科分类号
0829 ; 0907 ;
摘要
The peach [Prunus persica (L.) Batsch] genome sequence has been recently made available to the scientific community. This represents the culmination of a long process that started less than two decades ago with the release of the first marker-based linkage maps. The process has advanced rapidly with the studies of molecular diversity, detection of genome positions of major genes and quantitative trait loci, development of large DNA sequence collections, transcriptome and proteome analyses, comparative genomic studies, construction of a physical map, and development of databases where researchers can access information. The growth of genomics knowledge has been partly due to the simplicity of the peach genome: short (230 Mbp), diploid, and distributed on eight pairs of chromosomes. Its unusually short intergeneration period (2-4 years) and selfing mating behavior, plus a dynamic peach scientific community that has often collaborated in the development of the necessary tools, have also facilitated in constructing a robust sequence of its complete genome. Peach is one of the best known species genetically among tree crops, with the promise of rapid advancement in the next few years. This paper reviews the resources available and the main results obtained, with emphasis placed on application to the development of improved varieties.
引用
收藏
页码:531 / 547
页数:17
相关论文
共 120 条
  • [1] Abbott A. G., 2007, Fruits and nuts, P137, DOI 10.1007/978-3-540-34533-6_5
  • [2] Construction of saturated linkage maps of peach crosses segregating for characters controlling fruit quality, tree architecture and pest resistance
    Abbott, AG
    Rajapakse, S
    Sosinski, B
    Lu, ZX
    Sossey-Alaoui, K
    Gannavarapu, M
    Reighard, G
    Ballard, RE
    Baird, WV
    Scorza, R
    Callahan, A
    [J]. FOURTH INTERNATIONAL PEACH SYMPOSIUM, VOLS 1-2, 1998, (465): : 41 - 49
  • [3] A set of simple-sequence repeat (SSR) markers covering the Prunus genome
    Aranzana, MJ
    Pineda, A
    Cosson, P
    Dirlewanger, E
    Ascasibar, J
    Cipriani, G
    Ryder, CD
    Testolin, R
    Abbott, A
    King, GJ
    Iezzoni, AF
    Arús, P
    [J]. THEORETICAL AND APPLIED GENETICS, 2003, 106 (05) : 819 - 825
  • [4] Arumuganathan K., 1991, PLANT MOL BIOL REP, V9, P229, DOI [DOI 10.1007/BF02672073, 10.1007/BF02672073]
  • [5] Arus P., 2003, In the wake of the double helix: from the green revolution to the gene revolution, P309
  • [6] Arús P, 2006, PL BRED RE, V27, P175
  • [7] Bailey JS, 1949, MASS AGR EXP ST, V452
  • [8] Bailey JS, 1933, P AM SOC HORTIC SCI, V29, P127
  • [9] ESTIMATING NUCLEAR-DNA CONTENT IN PEACH AND RELATED DIPLOID SPECIES USING LASER FLOW-CYTOMETRY AND DNA HYBRIDIZATION
    BAIRD, WV
    ESTAGER, AS
    WELLS, JK
    [J]. JOURNAL OF THE AMERICAN SOCIETY FOR HORTICULTURAL SCIENCE, 1994, 119 (06) : 1312 - 1316
  • [10] Bassil N, 2010, COORDINATED EFFORT P, V2, P240