Machine learning for identification of frailty in Canadian primary care practices

被引:27
作者
Aponte-Hao, Sylvia [1 ]
Wong, Sabrina T. [2 ,3 ]
Thandi, Manpreet [2 ,3 ]
Ronksley, Paul [1 ]
McBrien, Kerry [1 ]
Lee, Joon [1 ]
Grandy, Mathew [4 ]
Mangin, Dee [5 ]
Katz, Alan [6 ]
Singer, Alexander [7 ]
Manca, Donna [8 ]
Williamson, Tyler [1 ]
机构
[1] Univ Calgary, Cumming Sch Med, 3330 Hosp Dr NW, Calgary, AB T2N 4N1, Canada
[2] Univ British Columbia, Ctr Hlth Serv & Policy Res, 2211 Wesbrook Mall, Vancouver, BC V6T 2B5, Canada
[3] Univ British Columbia, Sch Nursing, 2211 Wesbrook Mall, Vancouver, BC V6T 2B5, Canada
[4] Dalhousie Univ, Dept Family Med, 1465 Brenton St,Suite 402, Halifax, NS B3J 3T4, Canada
[5] Univ Manitoba, Fac Hlth Sci, Coll Med, 408-727 McDermot Ave, Winnipeg, MB R3E 3P5, Canada
[6] McMaster Univ, Dept Family Med, 1280 Main St W, Hamilton, ON L8S 4L8, Canada
[7] Univ Manitoba, Dept Family Med, 408-727 McDermot Ave, Winnipeg, MB R3E 3P5, Canada
[8] Univ Alberta, Dept Family Med, 610 Univ Terrace,8303-112 St NW, Edmonton, AB T6G 2T4, Canada
来源
INTERNATIONAL JOURNAL OF POPULATION DATA SCIENCE (IJPDS) | 2021年 / 6卷 / 01期
关键词
electronic medical records; electronic health records; machine learning; supervised machine learning; case definition; frailty; primary care; Canada; OLDER PERSONS; VALIDATION; ADULTS;
D O I
10.23889/ijpds.v6i1.1650
中图分类号
R19 [保健组织与事业(卫生事业管理)];
学科分类号
摘要
Introduction Frailty is a medical syndrome, commonly affecting people aged 65 years and over and is characterized by a greater risk of adverse outcomes following illness or injury. Electronic medical records contain a large amount of longitudinal data that can be used for primary care research. Machine learning can fully utilize this wide breadth of data for the detection of diseases and syndromes. The creation of a frailty case definition using machine learning may facilitate early intervention, inform advanced screening tests, and allow for surveillance. Objectives The objective of this study was to develop a validated case definition of frailty for the primary care context, using machine learning. Methods Physicians participating in the Canadian Primary Care Sentinel Surveillance Network across Canada were asked to retrospectively identify the level of frailty present in a sample of their own patients (total n = 5,466), collected from 2015-2019. Frailty levels were dichotomized using a cut-off of 5. Extracted features included previously prescribed medications, billing codes, and other routinely collected primary care data. We used eight supervised machine learning algorithms, with performance assessed using a hold-out test set. A balanced training dataset was also created by oversampling. Sensitivity analyses considered two alternative dichotomization cut-offs. Model performance was evaluated using area under the receiver-operating characteristic curve, F1, accuracy, sensitivity, specificity, negative predictive value and positive predictive value. Results The prevalence of frailty within our sample was 18.4%. Of the eight models developed to identify frail patients, an XGBoost model achieved the highest sensitivity (78.14%) and specificity (74.41%). The balanced training dataset did not improve classification performance. Sensitivity analyses did not show improved performance for cut-offs other than 5. Conclusion Supervised machine learning was able to create well performing classification models for frailty. Future research is needed to assess frailty inter-rater reliability, and link multiple data sources for frailty identification.
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页数:17
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