Characteristics and phylogenetic analysis of the complete chloroplast genome of Rosa glomerata (Rosaceae)
被引:1
作者:
Chen, Jiao-Feng
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机构:Yunnan Univ, Sch Ecol & Environm Sci, Kunming 650091, Yunnan, Peoples R China
Chen, Jiao-Feng
Wang, Si-Qi
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机构:Yunnan Univ, Sch Ecol & Environm Sci, Kunming 650091, Yunnan, Peoples R China
Wang, Si-Qi
Cai, Hou-Wen
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机构:Yunnan Univ, Sch Ecol & Environm Sci, Kunming 650091, Yunnan, Peoples R China
Cai, Hou-Wen
Zhu, Zhang-Ming
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机构:
Yunnan Univ, Sch Ecol & Environm Sci, Kunming 650091, Yunnan, Peoples R China
Yunnan Univ, Yunnan Key Lab Plateau Mt Ecol & Restorat Degrade, Kunming 650091, Yunnan, Peoples R ChinaYunnan Univ, Sch Ecol & Environm Sci, Kunming 650091, Yunnan, Peoples R China
Zhu, Zhang-Ming
[1
,2
]
机构:
[1] Yunnan Univ, Sch Ecol & Environm Sci, Kunming 650091, Yunnan, Peoples R China
[2] Yunnan Univ, Yunnan Key Lab Plateau Mt Ecol & Restorat Degrade, Kunming 650091, Yunnan, Peoples R China
来源:
MITOCHONDRIAL DNA PART B-RESOURCES
|
2022年
/
7卷
/
09期
基金:
中国国家自然科学基金;
关键词:
Rosa glomerata;
chloroplast;
phylogeny;
Rosaceae;
high-throughput sequencing;
D O I:
10.1080/23802359.2022.2107457
中图分类号:
Q3 [遗传学];
学科分类号:
071007 ;
090102 ;
摘要:
Rosa glomerata is a diffuse shrub belonging to Rosa sect. Synstylae. It is endemic to Southwest China and of high ornamental and economic value. However, its systematic position remains unclear. Here, the complete chloroplast genome of R. glomerata was assembled using high-throughput sequencing data. The cp genome is 157,064 bp in length with a large single-copy region (LSC) of 86,216 bp, a small single-copy region (SSC) of 18,752 bp, and a pair of inverted repeats (IRs) of 26,048 bp. The overall GC content is 37.2%. A total of 137 genes were annotated, including 90 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analysis revealed that R. glomerata is closely related to R. praelucens of R. sect. Microphyllae rather than species of R. sect. Synstylae.
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页码:1579 / 1580
页数:2
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