The Date Palm Tree Rhizosphere Is a Niche for Plant Growth Promoting Bacteria in the Oasis Ecosystem

被引:41
作者
Ferjani, Raoudha [1 ]
Marasco, Ramona [2 ]
Rolli, Eleonora [3 ]
Cherif, Hanene [1 ]
Cherif, Ameur [4 ]
Gtari, Maher [1 ]
Boudabous, Abdellatif [1 ]
Daffonchio, Daniele [2 ,3 ]
Ouzari, Hadda-Imene [1 ]
机构
[1] Univ Tunis El Manar, Fac Sci Tunis, Lab Microorganismes & Biomol Act LR03ES03, Tunis 2092, Tunisia
[2] King Abdullah Univ Sci & Technol, Biol & Environm Sci & Engn Div, Thuwal 239556900, Saudi Arabia
[3] Univ Milan, Dept Food Environm & Nutr Sci, I-20133 Milan, Italy
[4] Univ La Manouba, Inst Super Biotechnol Sidi Thabet, LR Biotechnol & Valorisat Biogeo Ressources LR11E, BiotechPole Sidi Thabet, Ariana 2020, Tunisia
关键词
PHOENIX-DACTYLIFERA L; GENETIC DIVERSITY; BACILLUS-CEREUS; RNA GENE; STRESS; SOIL; IDENTIFICATION; 16S; RHIZOBACTERIA; VARIABILITY;
D O I
10.1155/2015/153851
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
In arid ecosystems environmental factors such as geoclimatic conditions and agricultural practices are of major importance in shaping the diversity and functionality of plant-associated bacterial communities. Assessing the influence of such factors is a key to understand (i) the driving forces determining the shape of root-associated bacterial communities and (ii) the plant growth promoting (PGP) services they provide. Desert oasis environment was chosen as model ecosystem where agriculture is possible by the microclimate determined by the date palm cultivation. The bacterial communities in the soil fractions associated with the root system of date palms cultivated in seven oases in Tunisia were assessed by culture-independent and dependent approaches. According to 16S rRNA gene PCR-DGGE fingerprinting, the shapes of the date palm rhizosphere bacterial communities correlate with geoclimatic features along a north-south aridity transect. Despite the fact that the date palm root bacterial community structure was strongly influenced by macroecological factors, the potential rhizosphere services reflected in the PGP traits of isolates screened in vitro were conserved among the different oases. Such services were exerted by the 83% of the screened isolates. The comparable numbers and types of PGP traits indicate their importance in maintaining the plant functional homeostasis despite the different environmental selection pressures.
引用
收藏
页数:10
相关论文
共 69 条
[1]   Root-microbe systems: the effect and mode of interaction of Stress Protecting Agent (SPA) Stenotrophomonas rhizophila DSM14405T [J].
Alavi, Peyman ;
Starcher, Margaret R. ;
Zachow, Christin ;
Mueller, Henry ;
Berg, Gabriele .
FRONTIERS IN PLANT SCIENCE, 2013, 4
[2]   BASIC LOCAL ALIGNMENT SEARCH TOOL [J].
ALTSCHUL, SF ;
GISH, W ;
MILLER, W ;
MYERS, EW ;
LIPMAN, DJ .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) :403-410
[3]  
Anderson M. J., 2002, DISTLM V 2 FORTRAN C
[4]  
Anderson MJ, 2001, AUSTRAL ECOL, V26, P32, DOI 10.1111/j.1442-9993.2001.01070.pp.x
[5]  
Anderson MMJJ., 2008, PERMANOVA PRIMER GUI
[6]   Biogeography of soil archaea and bacteria along a steep precipitation gradient [J].
Angel, Roey ;
Soares, M. Ines M. ;
Ungar, Eugene D. ;
Gillor, Osnat .
ISME JOURNAL, 2010, 4 (04) :553-563
[7]  
[Anonymous], 2006, Primer
[8]   Differential Activity of Autochthonous Bacteria in Controlling Drought Stress in Native Lavandula and Salvia Plants Species Under Drought Conditions in Natural Arid Soil [J].
Armada, Elisabeth ;
Roldan, Antonio ;
Azcon, Rosario .
MICROBIAL ECOLOGY, 2014, 67 (02) :410-420
[9]   The Effect of Resource Islands on Abundance and Diversity of Bacteria in Arid Soils [J].
Bachar, Ami ;
Soares, M. Ines M. ;
Gillor, Osnat .
MICROBIAL ECOLOGY, 2012, 63 (03) :694-700
[10]   Soil Microbial Abundance and Diversity Along a Low Precipitation Gradient [J].
Bachar, Ami ;
Al-Ashhab, Ashraf ;
Soares, M. Ines M. ;
Sklarz, Menachem Y. ;
Angel, Roey ;
Ungar, Eugene D. ;
Gillor, Osnat .
MICROBIAL ECOLOGY, 2010, 60 (02) :453-461