Rapid prediction of solvation free energy and vapor pressure of liquid and solid from molecular dynamics simulation

被引:8
作者
Yang, Li [1 ,2 ]
Lin, Shiang-Tai [1 ]
机构
[1] Natl Taiwan Univ, Dept Chem Engn, Taipei 10617, Taiwan
[2] Wuhan Inst Technol, Sch Chem Engn & Pharm, Key Lab Novel Reactor & Green Chem Technol Hubei, Key Lab Green Chem Proc,Minist Educ, Wuhan 430073, Hubei, Peoples R China
基金
中国国家自然科学基金;
关键词
solvation free energy; vapor pressure; two-phase thermodynamic model; thermodynamic integration; free energy of liquid; free energy of solid; 2-PHASE THERMODYNAMIC MODEL; HISTOGRAM ANALYSIS METHOD; PARTITION-COEFFICIENTS; ABSOLUTE ENTROPY; ORGANIC LIQUIDS; AMINO-ACIDS; FORCE-FIELD; PHASE; FLUID; WATER;
D O I
10.1002/aic.14859
中图分类号
TQ [化学工业];
学科分类号
0817 ;
摘要
We show that the solvation free energy and vapor pressure, important thermodynamic properties of pure substances in liquid or solid states, can be obtained from short, about 20 ps, molecular dynamics simulations. The method combines the determination of free energy of a chemical in vacuum using the normal-mode analysis (NMA, energy minimization), and in the condensed phase using the two-phase thermodynamic (2PT) model. We have examined the calculation results for common liquids and solids, including water, alcohol, acid, aromatics, and alkanes. The results, referred to as 2PT-NMA, is comparable to those calculated from thermodynamic integration (TI) for liquids, and is readily applicable to solids, where simple TI is not applicable. Furthermore, the free energy from 2PT-NMA converges (20 ps) much faster than that from TI (1 ns). The new method could be a very useful tool for fast screening of condensed phase pressure from the trajectory of MD simulations. (c) 2015 American Institute of Chemical Engineers AIChE J, 61: 2298-2306, 2015
引用
收藏
页码:2298 / 2306
页数:9
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