Microbial Taxa Distribution Is Associated with Ecological Trophic Cascades along an Elevation Gradient

被引:192
作者
Yao, Fei [1 ,2 ]
Yang, Shan [1 ,3 ]
Wang, Zhirui [1 ,2 ]
Wang, Xue [1 ,2 ]
Ye, Ji [1 ]
Wang, Xugao [1 ]
DeBruyn, Jennifer M. [4 ]
Feng, Xue [1 ]
Jiang, Yong [1 ]
Li, Hui [1 ]
机构
[1] Chinese Acad Sci, Inst Appl Ecol, CAS Key Lab Forest Ecol & Management, Shenyang, Liaoning, Peoples R China
[2] Univ Chinese Acad Sci, Beijing, Peoples R China
[3] Shenyang Agr Univ, Coll Land & Environm, Shenyang, Liaoning, Peoples R China
[4] Univ Tennessee, Dept Biosyst Engn & Soil Sci, Knoxville, TN USA
基金
中国国家自然科学基金;
关键词
microbial biogeography; soil bacteria; soil fungi; amplicon sequencing; microbial taxonomic survey; oligotrophic-copiotrophic theory; elevational gradient; SOIL BACTERIAL COMMUNITIES; FUNGAL COMMUNITIES; LITTER DECOMPOSITION; ALTITUDINAL GRADIENT; NITROGEN DEPOSITION; CHANGBAI MOUNTAIN; ORGANIC-CARBON; ALPINE TUNDRA; FOREST TYPES; GLOBAL BIOGEOGRAPHY;
D O I
10.3389/fmicb.2017.02071
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The elevational pattern of soil microbial diversity along mountain slopes has received considerable interest over the last decade. An increasing amount of taxonomic data on soil microbial community composition along elevation gradients have been collected, however the trophic patterns and environmental drivers of elevational changes remain largely unclear. Here, we examined the distribution patterns of major soil bacterial and fungal taxa along the northern slope of Changbai Mountain, Northeast China, at five typical vegetation types located between 740 and 2,691 m above sea level. Elevational patterns of the relative abundance of specific microbial taxa could be partially explained by the oligotrophic-copiotrophic theory. Specifically, two dark-coniferous forests, located at mid-elevation sites, were considered to be oligotrophic habitats, with relatively higher soil C/N ratio and NH4+-N concentrations. As expected, oligotrophic microbial taxa, belonging to the bacterial phyla Acidobacteria and Gemmatimonadetes, and fungal phylum Basidiomycota, were predominant in the two dark-coniferous forests, exhibiting a mid-elevation maximum pattern. In contrast, the broad leaf-Korean pine mixed forest located at the foot of the mountain, Betula ermanii-dominated forest located below the tree line, and alpine tundra at the highest elevation were considered more copiotrophic habitats, characterized by higher substrate-induced-respiration rates and NO3--N concentrations. Microbial taxa considered to be so called copiotrophic members, such as bacterial phyla Proteobacteria and Actinobacteria, and fungal phylum Ascomycota, were relatively abundant in these locations, resulting in a mid-elevation minimum pattern. At finer taxonomic levels, the two most abundant proteobacterial classes, alpha-and beta-Proteobacteria, along with Acidobacteria Gp1, 2, 3, 15, and the Basidiomycotal class of Tremellomycetes were classified with the copiotrophic group. Gamma-and delta-Proteobacteria, Acidobacteria Gp4, 6, 7, 16, and Basidiomycotal class of Agaricomycetes were classified as oligotrophic taxa. This work uses the oligotrophic-copiotrophic theory to explain the elevational distribution pattern of the relative abundance of specific microbial taxa, confirming some of the existing trophic classifications of microbial taxa and expanding on the theory to include a broader range of taxonomic levels.
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页数:17
相关论文
共 120 条
[1]   Regional and local patterns of ectomycorrhizal fungal diversity and community structure along an altitudinal gradient in the Hyrcanian forests of northern Iran [J].
Bahram, Mohammad ;
Polme, Sergei ;
Koljalg, Urmas ;
Zarre, Shahin ;
Tedersoo, Leho .
NEW PHYTOLOGIST, 2012, 193 (02) :465-473
[2]   Soil Microbial Community Successional Patterns during Forest Ecosystem Restoration [J].
Banning, Natasha C. ;
Gleeson, Deirdre B. ;
Grigg, Andrew H. ;
Grant, Carl D. ;
Andersen, Gary L. ;
Brodie, Eoin L. ;
Murphy, D. V. .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2011, 77 (17) :6158-6164
[3]   Influence of tree species on understory vegetation diversity and mechanisms involved - A critical review for temperate and boreal forests [J].
Barbier, Stephane ;
Gosselin, Frederic ;
Balandier, Philippe .
FOREST ECOLOGY AND MANAGEMENT, 2008, 254 (01) :1-15
[4]   SULFATE ADSORPTION CAPACITY AND PH OF UPLAND PODZOLIC SOILS IN SCOTLAND - EFFECTS OF PARENT MATERIAL, TEXTURE AND PRECIPITATION CHEMISTRY [J].
BARTON, D ;
HOPE, D ;
BILLETT, MF ;
CRESSER, MS .
APPLIED GEOCHEMISTRY, 1994, 9 (02) :127-139
[5]   Influence of repeated prescribed burning on incorporation of 13C from cellulose by forest soil fungi as determined by RNA stable isotope probing [J].
Bastias, Brigitte A. ;
Anderson, Ian C. ;
Rangel-Castro, J. Ignacio ;
Parkin, Pamela I. ;
Prosser, James I. ;
Cairney, John W. G. .
SOIL BIOLOGY & BIOCHEMISTRY, 2009, 41 (03) :467-472
[6]   ITS as an environmental DNA barcode for fungi: an in silico approach reveals potential PCR biases [J].
Bellemain, Eva ;
Carlsen, Tor ;
Brochmann, Christian ;
Coissac, Eric ;
Taberlet, Pierre ;
Kauserud, Havard .
BMC MICROBIOLOGY, 2010, 10
[7]   The under-recognized dominance of Verrucomicrobia in soil bacterial communities [J].
Bergmann, Gaddy T. ;
Bates, Scott T. ;
Eilers, Kathryn G. ;
Lauber, Christian L. ;
Caporaso, J. Gregory ;
Walters, William A. ;
Knight, Rob ;
Fierer, Noah .
SOIL BIOLOGY & BIOCHEMISTRY, 2011, 43 (07) :1450-1455
[8]   The leaching of Eucalyptus hybrids and Acacia auriculiformis leaf litter:: laboratory experiments on early decomposition and ecological implications in congolese tree plantations [J].
Bernhard-Reversat, F .
APPLIED SOIL ECOLOGY, 1999, 12 (03) :251-261
[9]  
Boone D., 2001, ARCHAEA DEEP BRANCHI
[10]   CONSTRAINTS OF NUTRIENT AVAILABILITY ON PRIMARY PRODUCTION IN 2 ALPINE TUNDRA COMMUNITIES [J].
BOWMAN, WD ;
THEODOSE, TA ;
SCHARDT, JC ;
CONANT, RT .
ECOLOGY, 1993, 74 (07) :2085-2097