Genome-Wide Identification and Expression Profiling of the BZR Transcription Factor Gene Family in Nicotiana benthamiana

被引:18
作者
Chen, Xuwei [1 ]
Wu, Xinyang [1 ,2 ]
Qiu, Shiyou [1 ]
Zheng, Hongying [1 ]
Lu, Yuwen [1 ]
Peng, Jiejun [1 ]
Wu, Guanwei [1 ]
Chen, Jianping [1 ]
Rao, Shaofei [1 ]
Yan, Fei [1 ]
机构
[1] Ningbo Univ, Minist Agr & Zhejiang Prov, State Key Lab Managing Biot & Chem Threats Qual &, Inst Plant Virol,Key Lab Biotechnol Plant Protect, Ningbo 315211, Peoples R China
[2] China Jiliang Univ, Coll Life Sci, Hangzhou 310058, Peoples R China
关键词
Brassinazole-resistant (BZR) transcription factor; Nicotiana benthamiana; genome-wide expression analysis; abiotic stress; BRASSINOSTEROID SIGNAL-TRANSDUCTION; PLANT-GROWTH; RECEPTOR KINASES; STRESS; SUPPRESSION; MECHANISMS; NETWORKS;
D O I
10.3390/ijms221910379
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Brassinazole-resistant (BZR) family genes encode plant-specific transcription factors (TFs), play essential roles in the regulation of plant growth and development, and have multiple stress-resistance functions. Nicotiana benthamiana is a model plant widely used in basic research. However, members of the BZR family in N. benthamiana have not been identified, and little is known about their function in abiotic stress. In this study, a total of 14 BZR members were identified in the N. benthamiana genome, which could be divided into four groups according to a phylogenetic tree. NbBZRs have similar exon-intron structures and conserved motifs, and may be regulated by cis-acting elements such as STRE, TCA, and ARE, etc. Organ-specific expression analysis showed that NbBZR members have different and diverse expression patterns in different tissues, and most of the members are expressed in roots, stems, and leaves. The analysis of the expression patterns in response to different abiotic stresses showed that all the tested NbBZR members showed a significant down-regulation after drought treatment. Many NbBZR genes also responded in various ways to cold, heat and salt stress treatments. The results imply that NbBZRs have multiple functions related to stress resistance.
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页数:16
相关论文
共 49 条
[21]  
Li JM, 2002, SCIENCE, V295, P1299
[22]   BIN2, a new brassinosteroid-insensitive locus in Arabidopsis [J].
Li, JM ;
Nam, KH ;
Vafeados, D ;
Chory, J .
PLANT PHYSIOLOGY, 2001, 127 (01) :14-22
[23]   It runs in the family: regulation of brassinosteroid signaling by the BZR1-BES1 class of transcription factors [J].
Li, L ;
Deng, XW .
TRENDS IN PLANT SCIENCE, 2005, 10 (06) :266-268
[24]   Genome-Wide Identification, Characterization, and Expression Profiling of the Legume BZR Transcription Factor Gene Family [J].
Li, Yueying ;
He, Liangliang ;
Li, Jing ;
Chen, Jianghua ;
Liu, Changning .
FRONTIERS IN PLANT SCIENCE, 2018, 9
[25]   Analysis of relative gene expression data using real-time quantitative PCR and the 2-ΔΔCT method [J].
Livak, KJ ;
Schmittgen, TD .
METHODS, 2001, 25 (04) :402-408
[26]   Identification and characterization of the BZR transcription factor family and its expression in response to abiotic stresses in Zea mays L. [J].
Manoli, Alessandro ;
Trevisan, Sara ;
Quaggiotti, Silvia ;
Varotto, Serena .
PLANT GROWTH REGULATION, 2018, 84 (03) :423-436
[27]   PIF4-induced BR synthesis is critical to diurnal and thermomorphogenic growth [J].
Martinez, Cristina ;
Espinosa-Ruiz, Ana ;
de Lucas, Miguel ;
Bernardo-Garcia, Stella ;
Franco-Zorrilla, Jose M. ;
Prat, Salome .
EMBO JOURNAL, 2018, 37 (23)
[28]   Cross-talk of Brassinosteroid signaling in controlling growth and stress responses [J].
Nolan, Trevor ;
Chen, Jiani ;
Yin, Yanhai .
BIOCHEMICAL JOURNAL, 2017, 474 :2641-2661
[29]   Brassinosteroids: Multidimensional Regulators of Plant Growth, Development, and Stress Responses [J].
Nolan, Trevor M. ;
Vukasinovic, Nemanja ;
Liu, Derui ;
Russinova, Eugenia ;
Yin, Yanhai .
PLANT CELL, 2020, 32 (02) :295-318
[30]   Selective Autophagy of BES1 Mediated by DSK2 Balances Plant Growth and Survival [J].
Nolan, Trevor M. ;
Brennan, Benjamin ;
Yang, Mengran ;
Chen, Jiani ;
Zhang, Mingcai ;
Li, Zhaohu ;
Wang, Xuelu ;
Bassham, Diane C. ;
Walley, Justin ;
Yin, Yanhai .
DEVELOPMENTAL CELL, 2017, 41 (01) :33-+