Identifying and Naming Plant-Pathogenic Fungi: Past, Present, and Future

被引:116
作者
Crous, Pedro W. [1 ,2 ,6 ]
Hawksworth, David L. [3 ,4 ,5 ]
Wingfield, Michael J. [6 ]
机构
[1] CBS KNAW Fungal Biodivers Ctr, NL-3584 CT Utrecht, Netherlands
[2] WUR, Lab Phytopathol, NL-6708 PB Wageningen, Netherlands
[3] Univ Complutense Madrid, Fac Farm, Dept Biol Vegetal 2, Madrid 28040, Spain
[4] Nat Hist Museum, Dept Life Sci, London SW7 5BD, England
[5] Royal Bot Gardens, Mycol Sect, Richmond TW9 3DS, Surrey, England
[6] Univ Pretoria, Dept Microbiol & Plant Pathol, FABI, ZA-0002 Pretoria, South Africa
来源
ANNUAL REVIEW OF PHYTOPATHOLOGY, VOL 53 | 2015年 / 53卷
关键词
Code of Nomenclature; DNA barcoding; MycoBank; phylogeny; polyphasic identification; systematics; POLYPHYLETIC NATURE; POLYPHASIC APPROACH; INTERNATIONAL-CODE; MYCORRHIZAL FUNGI; SPECIES CONCEPTS; GENERIC NAMES; TAXONOMY; GENUS; IDENTIFICATION; CLASSIFICATION;
D O I
10.1146/annurev-phyto-080614-120245
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Scientific names are crucial in communicating knowledge about fungi. In plant pathology, they link information regarding the biology, host range, distribution, and potential risk. Our understanding of fungal biodiversity and fungal systematics has undergone an exponential leap, incorporating genomics, web-based systems, and DNA data for rapid identification to link species to metadata. The impact of our ability to recognize hitherto unknown organisms on plant pathology and trade is enormous and continues to grow. Major challenges for phytomycology are intertwined with the Genera of Fungi project, which adds DNA barcodes to known biodiversity and corrects the application of old, established names via epi- or neotypification. Implementing the one fungus-one name system and linking names to validated type specimens, cultures, and reference sequences will provide the foundation on which the future of plant pathology and the communication of names of plant pathogens will rest.
引用
收藏
页码:247 / 267
页数:21
相关论文
共 116 条
[41]  
Harrington T.C., 1999, Structure and Dynamics of Fungal Populations, P43, DOI DOI 10.1007/978-94-011-4423-0_3
[42]  
Hawksworth D., 2004, TAXON, V53, P596, DOI DOI 10.2307/4135654
[43]   Global species numbers of fungi: are tropical studies and molecular approaches contributing to a more robust estimate? [J].
Hawksworth, D. L. .
BIODIVERSITY AND CONSERVATION, 2012, 21 (09) :2425-2433
[44]  
Hawksworth D L., 1996, Culture Collections to Improve the Quality of Life, P26
[45]   The Amsterdam Declaration on Fungal Nomenclature [J].
Hawksworth, David L. ;
Crous, Pedro W. ;
Redhead, Scott A. ;
Reynolds, Don R. ;
Samson, Robert A. ;
Seifert, Keith A. ;
Taylor, John W. ;
Wingfield, Michael J. ;
Abaci, Ozlem ;
Aime, Catherine ;
Asan, Ahmet ;
Bai, Feng-Yan ;
de Beer, Z. Wilhelm ;
Begerow, Dominik ;
Berikten, Derya ;
Boekhout, Teun ;
Buchanan, Peter K. ;
Burgess, Treena ;
Buzina, Walter ;
Cai, Lei ;
Cannon, Paul F. ;
Crane, J. Leland ;
Damm, Ulrike ;
Daniel, Heide-Marie ;
van Diepeningen, Anne D. ;
Druzhinina, Irina ;
Dyer, Paul S. ;
Eberhardt, Ursula ;
Fell, Jack W. ;
Frisvad, Jens C. ;
Geiser, David M. ;
Geml, Jozsef ;
Glienke, Chirlei ;
Grafenhan, Tom ;
Groenewald, Johannes Z. ;
Groenewald, Marizeth ;
de Gruyter, Johannes ;
Gueho-Kellermann, Eveline ;
Guo, Liang-Dong ;
Hibbett, David S. ;
Hong, Seung-Beom ;
de Hoog, G. Sybren ;
Houbraken, Jos ;
Huhndorf, Sabine M. ;
Hyde, Kevin D. ;
Ismail, Ahmed ;
Johnston, Peter R. ;
Kadaifciler, Duygu G. ;
Kirk, Paul M. ;
Koljalg, Urmas .
IMA FUNGUS, 2011, 2 (01) :105-112
[46]   THE FUNGAL DIMENSION OF BIODIVERSITY - MAGNITUDE, SIGNIFICANCE, AND CONSERVATION [J].
HAWKSWORTH, DL .
MYCOLOGICAL RESEARCH, 1991, 95 :641-655
[47]  
Hibbett David S., 2011, Fungal Biology Reviews, V25, P38, DOI 10.1016/j.fbr.2011.01.001
[48]  
Hyde KD, 2013, FUNGAL DIVERS, V63, P1, DOI 10.1007/s13225-013-0263-4
[49]   Recommendations on generic names competing for use in Leotiomycetes (Ascomycota) [J].
Johnston, Peter R. ;
Seifert, Keith A. ;
Stone, Jeffrey K. ;
Rossman, Amy Y. ;
Marvanova, Ludmila .
IMA FUNGUS, 2014, 5 (01) :91-120
[50]   Ion Torrent PGM as Tool for Fungal Community Analysis: A Case Study of Endophytes in Eucalyptus grandis Reveals High Taxonomic Diversity [J].
Kemler, Martin ;
Garnas, Jeff ;
Wingfield, Michael J. ;
Gryzenhout, Marieka ;
Pillay, Kerry-Anne ;
Slippers, Bernard .
PLOS ONE, 2013, 8 (12)