Phylogeny of the "Forgotten" Cellular Slime Mold, Fonticula alba, Reveals a Key Evolutionary Branch within Opisthokonta

被引:91
作者
Brown, Matthew W. [1 ]
Spiegel, Frederick W. [1 ]
Silberman, Jeffrey D. [1 ]
机构
[1] Univ Arkansas, Dept Biol Sci, Fayetteville, AR 72701 USA
基金
美国国家科学基金会;
关键词
Fonticula alba; Opisthokonta; multicellularity; aggregation; Nucletmycea; protist; CAPSASPORA-OWCZARZAKI; ORIGIN; GENOME; GEN; MULTICELLULARITY; EUKARYOTES; CHOANOZOA; RELATIVES; APUSOZOA; AFFINITY;
D O I
10.1093/molbev/msp185
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The shared ancestry between Fungi and animals has been unequivocally demonstrated by abundant molecular and morphological data for well over a decade. Along with the animals and Fungi, multiple protists have been placed in the supergroup Opisthokonta making it exceptionally diverse. In an effort to place the cellular slime mold Fonticula alba, an amoeboid protist with aggregative, multicellular fruiting, we sequenced five nuclear encoded genes; small subunit ribosomal RNA, actin, beta-tubulin, elongation factor 1-alpha, and the cytosolic isoform of heat shock protein 70 for phylogenetic analyses. Molecular trees demonstrate that Fonticula is an opisthokont that branches sister to filose amoebae in the genus Nuclearia. Fonticula plus Nuclearia are sister to Fungi. We propose a new name for this well-supported clade, Nucletmycea, incorporating Nuclearia, Fonticula, and Fungi. Fonticula represents the first example of a cellular slime mold morphology within Opisthokonta. Thus, there are four types of multicellularity in the supergroup-animal, fungal, colonial, and now aggregative. Our data indicate that multicellularity in Fonticula evolved independent of that found in the fungal and animal radiations. With the rapidly expanding sequence and genomic data becoming available from many opisthokont lineages, Fonticula may be fundamental to understanding opisthokont evolution as well as any possible commonalities involved with the evolution of multicellularity.
引用
收藏
页码:2699 / 2709
页数:11
相关论文
共 59 条
[1]   ProtTest: selection of best-fit models of protein evolution [J].
Abascal, F ;
Zardoya, R ;
Posada, D .
BIOINFORMATICS, 2005, 21 (09) :2104-2105
[2]   The new higher level classification of eukaryotes with emphasis on the taxonomy of protists [J].
Adl, SM ;
Simpson, AGB ;
Farmer, MA ;
Andersen, RA ;
Anderson, OR ;
Barta, JR ;
Bowser, SS ;
Brugerolle, G ;
Fensome, RA ;
Fredericq, S ;
James, TY ;
Karpov, S ;
Kugrens, P ;
Krug, J ;
Lane, CE ;
Lewis, LA ;
Lodge, J ;
Lynn, DH ;
Mann, DG ;
McCourt, RM ;
Mendoza, L ;
Moestrup, O ;
Mozley-Standridge, SE ;
Nerad, TA ;
Shearer, CA ;
Smirnov, AV ;
Spiegel, FW ;
Taylor, MFJR .
JOURNAL OF EUKARYOTIC MICROBIOLOGY, 2005, 52 (05) :399-451
[3]   Parallel metropolis coupled Markov chain Monte Carlo for Bayesian phylogenetic inference [J].
Altekar, G ;
Dwarkadas, S ;
Huelsenbeck, JP ;
Ronquist, F .
BIOINFORMATICS, 2004, 20 (03) :407-415
[4]  
AMARALZETTLER LA, 2001, J EUKARYOT MICROBIOL, V48, P293
[5]  
[Anonymous], 2006, GENETIC ALGORITHM AP
[6]   Origin and evolution of the slime molds (Mycetozoa) [J].
Baldauf, SL ;
Doolittle, WF .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1997, 94 (22) :12007-12012
[7]   ANIMALS AND FUNGI ARE EACH OTHERS CLOSEST RELATIVES - CONGRUENT EVIDENCE FROM MULTIPLE PROTEINS [J].
BALDAUF, SL ;
PALMER, JD .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1993, 90 (24) :11558-11562
[8]  
BISTIS GEORGE, 1956, BULL TORREY BOT CLUB, V83, P35, DOI 10.2307/2482822
[9]   Amoeba at attention:: Phylogenetic affinity of Sappinia pedata [J].
Brown, Matthew W. ;
Spiegel, Frederick W. ;
Silberman, Jeffrey D. .
JOURNAL OF EUKARYOTIC MICROBIOLOGY, 2007, 54 (06) :511-519
[10]   Fungal evolution: the case of the vanishing mitochondrion [J].
Bullerwell, CE ;
Lang, BF .
CURRENT OPINION IN MICROBIOLOGY, 2005, 8 (04) :362-369