Positioning of aquatic animals based on time-of-arrival and random walk models using YAPS (Yet Another Positioning Solver)

被引:73
作者
Baktoft, Henrik [1 ]
Gjelland, Karl Oystein [2 ]
Okland, Finn [3 ]
Thygesen, Uffe Hogsbro [4 ]
机构
[1] Tech Univ Denmark, Natl Inst Aquat Resources, DK-8600 Silkeborg, Denmark
[2] Norwegian Inst Nat Res, N-9007 Tromso, Norway
[3] Norwegian Inst Nat Res, N-7485 Trondheim, Norway
[4] Tech Univ Denmark, Natl Inst Aquat Resources, DK-2800 Lyngby, Denmark
关键词
STATE-SPACE MODELS; ACOUSTIC TELEMETRY; TRACKING; SYSTEM; FISH; BEHAVIOR;
D O I
10.1038/s41598-017-14278-z
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Aquatic positional telemetry offers vast opportunities to study in vivo behaviour of wild animals, but there is room for improvement in the data quality provided by current procedures for estimating positions. Here we present a novel positioning method called YAPS (Yet Another Positioning Solver), involving Maximum Likelihood analysis of a state-space model applied directly to time of arrival (TOA) data in combination with a movement model. YAPS avoids the sequential positioning-filtering-approach applied in alternative tools by using all available data in a single model, and offers better accuracy and error control. Feasibility and performance of YAPS was rigorously tested in a simulation study and by applying YAPS to data from an acoustic transmitter towed in a receiver array. Performance was compared to an alternative positioning model and proprietary software. The simulation study and field test revealed that YAPS performance was better and more consistent than alternatives. We conclude that YAPS outperformed the compared alternative methods, and that YAPS constitute a vast improvement to currently available positioning software in acoustic telemetry. Additionally, in contrast to vendor-supplied solutions, YAPS is transparent, flexible and can easily be adapted and extended for further improvements or to meet study specific requirements such as three-dimensional positioning.
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页数:10
相关论文
共 26 条
[1]   Fast fitting of non-Gaussian state-space models to animal movement data via Template Model Builder [J].
Albertsen, Christoffer Moesgaard ;
Whoriskey, Kim ;
Yurkowski, David ;
Nielsen, Anders ;
Flemming, Joanna Mills .
ECOLOGY, 2015, 96 (10) :2598-2604
[2]   Phenotypic variation in metabolism and morphology correlating with animal swimming activity in the wild: relevance for the OCLTT (oxygen- and capacity-limitation of thermal tolerance), allocation and performance models [J].
Baktoft, Henrik ;
Jacobsen, Lene ;
Skov, Christian ;
Koed, Anders ;
Jepsen, Niels ;
Berg, Soren ;
Boel, Mikkel ;
Aarestrup, Kim ;
Svendsen, Jon C. .
CONSERVATION PHYSIOLOGY, 2016, 4
[3]   Performance Assessment of Two Whole-Lake Acoustic Positional Telemetry Systems - Is Reality Mining of Free-Ranging Aquatic Animals Technologically Possible? [J].
Baktoft, Henrik ;
Zajicek, Petr ;
Klefoth, Thomas ;
Svendsen, Jon C. ;
Jacobsen, Lene ;
Pedersen, Martin Waever ;
Morla, David March ;
Skov, Christian ;
Nakayama, Shinnosuke ;
Arlinghaus, Robert .
PLOS ONE, 2015, 10 (05)
[4]   Seasonal and diel effects on the activity of northern pike studied by high-resolution positional telemetry [J].
Baktoft, Henrik ;
Aarestrup, Kim ;
Berg, Soren ;
Boel, Mikkel ;
Jacobsen, Lene ;
Jepsen, Niels ;
Koed, Anders ;
Svendsen, Jon C. ;
Skov, Christian .
ECOLOGY OF FRESHWATER FISH, 2012, 21 (03) :386-394
[5]   Testing an autonomous acoustic telemetry positioning system for fine-scale space use in marine animals [J].
Biesinger, Zy ;
Bolker, Benjamin M. ;
Marcinek, Douglas ;
Grothues, Thomas M. ;
Dobarro, Joseph A. ;
Lindberg, William J. .
JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY, 2013, 448 :46-56
[6]   Use of CDMA acoustic telemetry to document 3-D positions of fish: Relevance to the design and monitoring of aquatic protected areas [J].
Cooke, SJ ;
Niezgoda, GH ;
Hanson, KC ;
Suski, CD ;
Phelan, FJS ;
Tinline, R ;
Philipp, DP .
MARINE TECHNOLOGY SOCIETY JOURNAL, 2005, 39 (01) :31-41
[7]   A Cabled Acoustic Telemetry System for Detecting and Tracking Juvenile Salmon: Part 2. Three-Dimensional Tracking and Passage Outcomes [J].
Deng, Z. Daniel ;
Weiland, Mark A. ;
Fu, Tao ;
Seim, Tom A. ;
LaMarche, Brian L. ;
Choi, Eric Y. ;
Carlson, Thomas J. ;
Eppard, M. Brad .
SENSORS, 2011, 11 (06) :5661-5676
[8]  
Durbin J, 2001, Time Series Analysis by State Space Methods
[9]   Testing a new acoustic telemetry technique to quantify long-term, fine-scale movements of aquatic animals [J].
Espinoza, Mario ;
Farrugia, Thomas J. ;
Webber, Dale M. ;
Smith, Frank ;
Lowe, Christopher G. .
FISHERIES RESEARCH, 2011, 108 (2-3) :364-371
[10]   Intersexual variation in the seasonal behaviour and depth distribution of a freshwater temperate fish, the largemouth bass [J].
Hanson, K. C. ;
Hasler, C. T. ;
Cooke, S. J. ;
Suski, C. D. ;
Philipp, D. P. .
CANADIAN JOURNAL OF ZOOLOGY, 2008, 86 (08) :801-811