Genome Sequence of Corynebacterium glutamicum ATCC 14067, Which Provides Insight into Amino Acid Biosynthesis in Coryneform Bacteria

被引：23

作者：

Lv, Yangyong ^{[1
]}

Liao, Juanjun ^{[1
]}

Wu, Zhanhong ^{[1
]}

Han, Shuangyan ^{[1
]}

Lin, Ying ^{[1
]}

Zheng, Suiping ^{[1
]}

机构：

[1] S China Univ Technol, Sch Biosci & Bioengn, Dept Bioengn, Guangzhou, Guangdong, Peoples R China

来源：

JOURNAL OF BACTERIOLOGY | 2012年 / 194卷 / 03期

关键词：

RNA GENES; TOOL;

D O I：

10.1128/JB.06514-11

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

We report the genome sequence of Corynebacterium glutamicum ATCC 14067 (once named Brevibacterium flavum), which is useful for taxonomy research and further molecular breeding in amino acid production. Preliminary comparison with those of the reported coryneform strains revealed some notable differences that might be related to the difficulties in molecular manipulation.

引用

页码：742 / 743

页数：2

共 14 条

[1] BASIC LOCAL ALIGNMENT SEARCH TOOL [J].

ALTSCHUL, SF ;

GISH, W ;

MILLER, W ;

MYERS, EW ;

LIPMAN, DJ .

JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) :403-410

[2] GeneMarkS: a self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions [J].

Besemer, J ;

Lomsadze, A ;

Borodovsky, M .

NUCLEIC ACIDS RESEARCH, 2001, 29 (12) :2607-2618

[3]

BONAMY C, 1990, FEMS MICROBIOL LETT, V66, P263, DOI 10.1016/0378-1097(90)90294-Z

[4] Identifying bacterial genes and endosymbiont DNA with Glimmer [J].

Delcher, Arthur L. ;

Bratke, Kirsten A. ;

Powers, Edwin C. ;

Salzberg, Steven L. .

BIOINFORMATICS, 2007, 23 (06) :673-679

[5] The Corynebacterium glutamicum genome:: features and impacts on biotechnological processes [J].

Ikeda, M ;

Nakagawa, S .

APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 2003, 62 (2-3) :99-109

[6] The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins [J].

Kalinowski, J ;

Bathe, B ;

Bartels, D ;

Bischoff, N ;

Bott, M ;

Burkovski, A ;

Dusch, N ;

Eggeling, L ;

Eikmanns, BJ ;

Gaigalat, L ;

Goesmann, A ;

Hartmann, M ;

Huthmacher, K ;

Krämer, R ;

Linke, B ;

McHardy, AC ;

Meyer, F ;

Möckel, B ;

Pfefferle, W ;

Pühler, A ;

Rey, DA ;

Rückert, C ;

Rupp, O ;

Sahm, H ;

Wendisch, VF ;

Wiegräbe, I ;

Tauch, A .

JOURNAL OF BIOTECHNOLOGY, 2003, 104 (1-3) :5-25

[7] KEGG for linking genomes to life and the environment [J].

Kanehisa, Minoru ;

Araki, Michihiro ;

Goto, Susumu ;

Hattori, Masahiro ;

Hirakawa, Mika ;

Itoh, Masumi ;

Katayama, Toshiaki ;

Kawashima, Shuichi ;

Okuda, Shujiro ;

Tokimatsu, Toshiaki ;

Yamanishi, Yoshihiro .

NUCLEIC ACIDS RESEARCH, 2008, 36 :D480-D484

[8] RNAmmer:: consistent and rapid annotation of ribosomal RNA genes [J].

Lagesen, Karin ;

Hallin, Peter ;

Rodland, Einar Andreas ;

Stærfeldt, Hans-Henrik ;

Rognes, Torbjorn ;

Ussery, David W. .

NUCLEIC ACIDS RESEARCH, 2007, 35 (09) :3100-3108

[9] De novo assembly of human genomes with massively parallel short read sequencing [J].

Li, Ruiqiang ;

Zhu, Hongmei ;

Ruan, Jue ;

Qian, Wubin ;

Fang, Xiaodong ;

Shi, Zhongbin ;

Li, Yingrui ;

Li, Shengting ;

Shan, Gao ;

Kristiansen, Karsten ;

Li, Songgang ;

Yang, Huanming ;

Wang, Jian ;

Wang, Jun .

GENOME RESEARCH, 2010, 20 (02) :265-272

[10] TRANSFER OF BREVIBACTERIUM-DIVARICATUM DSM-20297T, BREVIBACTERIUM-FLAVUM DSM-20411, BREVIBACTERIUM-LACTOFERMENTUM DSM-20412 AND DSM-1412, AND CORYNEBACTERIUM-LILIUM DSM-20137T TO CORYNEBACTERIUM-GLUTAMICUM AND THEIR DISTINCTION BY RIBOSOMAL-RNA GENE RESTRICTION PATTERNS [J].

LIEBL, W ;

EHRMANN, M ;

LUDWIG, W ;

SCHLEIFER, KH .

INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1991, 41 (02) :255-260

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