Discovering Anti-Cancer Drugs via Computational Methods

被引:202
作者
Cui, Wenqiang [1 ,2 ]
Aouidate, Adnane [1 ]
Wang, Shouguo [1 ]
Yu, Qiuliyang [1 ]
Li, Yanhua [2 ]
Yuan, Shuguang [1 ]
机构
[1] Chinese Acad Sci, Shenzhen Inst Adv Technol, Shenzhen, Peoples R China
[2] Northeast Agr Univ, Coll Vet Med, Harbin, Peoples R China
关键词
anti-cancer; CADD; drug discovery; AI; computational methods; SUPERVISED MOLECULAR-DYNAMICS; GROWTH-FACTOR RECEPTOR; TARGET INTERACTION PREDICTION; PROTEIN-COUPLED RECEPTORS; C-MET; PHARMACOPHORE MODEL; NEURAL-NETWORKS; INHIBITOR; CANCER; HSP90;
D O I
10.3389/fphar.2020.00733
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
New drug discovery has been acknowledged as a complicated, expensive, time-consuming, and challenging project. It has been estimated that around 12 years and 2.7 billion USD, on average, are demanded for a new drug discovery via traditional drug development pipeline. How to reduce the research cost and speed up the development process of new drug discovery has become a challenging, urgent question for the pharmaceutical industry. Computer-aided drug discovery (CADD) has emerged as a powerful, and promising technology for faster, cheaper, and more effective drug design. Recently, the rapid growth of computational tools for drug discovery, including anticancer therapies, has exhibited a significant and outstanding impact on anticancer drug design, and has also provided fruitful insights into the area of cancer therapy. In this work, we discussed the different subareas of the computer-aided drug discovery process with a focus on anticancer drugs.
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页数:14
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共 134 条
[121]   Structure-based discovery of an organic compound that binds Bcl-2 protein and induces apoptosis of tumor cells [J].
Wang, JL ;
Liu, DX ;
Zhang, ZJ ;
Shan, SM ;
Han, XB ;
Srinivasula, SM ;
Croce, CM ;
Alnemri, ES ;
Huang, ZW .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (13) :7124-7129
[122]   HSP90 and the chaperoning of cancer [J].
Whitesell, L ;
Lindquist, SL .
NATURE REVIEWS CANCER, 2005, 5 (10) :761-772
[123]   Discovery and development of sorafenib: a multikinase inhibitor for treating cancer [J].
Wilhelm, Scott ;
Carter, Christopher ;
Lynch, Mark ;
Lowinger, Timothy ;
Dumas, Jacques ;
Smith, Roger A. ;
Schwartz, Brian ;
Simantov, Ronit ;
Kelley, Susan .
NATURE REVIEWS DRUG DISCOVERY, 2006, 5 (10) :835-844
[124]   Efficient overlay of small organic molecules using 3D pharmacophores [J].
Wolber, Gerhard ;
Dornhofer, Alois A. ;
Langer, Thierry .
JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, 2006, 20 (12) :773-788
[125]   A unique structure for epidermal growth factor receptor bound to GW572016 (Lapatinib): Relationships among protein conformation, inhibitor off-rate, and receptor activity in tumor cells [J].
Wood, ER ;
Truesdale, AT ;
McDonald, OB ;
Yuan, D ;
Hassell, A ;
Dickerson, SH ;
Ellis, B ;
Pennisi, C ;
Horne, E ;
Lackey, K ;
Alligood, KJ ;
Rusnak, DW ;
Gilmer, TM ;
Shewchuk, L .
CANCER RESEARCH, 2004, 64 (18) :6652-6659
[126]   Drugging the cancer chaperone HSP90 combinatorial therapeutic exploitation of oncogene addiction and tumor stress [J].
Workman, Paul ;
Burrows, Francis ;
Neckers, Len ;
Rosen, Neal .
STRESS RESPONSES IN BIOLOGY AND MEDICINE: STRESS OF LIFE IN MOLECULES, CELLS, ORGANISMS, AND PSYCHOSOCIAL COMMUNITIES, 2007, 1113 :202-216
[127]   Prediction of drug-target interaction networks from the integration of chemical and genomic spaces [J].
Yamanishi, Yoshihiro ;
Araki, Michihiro ;
Gutteridge, Alex ;
Honda, Wataru ;
Kanehisa, Minoru .
BIOINFORMATICS, 2008, 24 (13) :I232-I240
[128]   Crystal structures and antitumor activity evaluation against gastric carcinoma of two novel coordination polymers [J].
Yan, Bin ;
Yang, Wenjie ;
Han, Xiyuan ;
Han, Lihong .
MAIN GROUP CHEMISTRY, 2019, 18 (03) :239-246
[129]   Pharmacophore modeling and applications in drug discovery: challenges and recent advances [J].
Yang, Sheng-Yong .
DRUG DISCOVERY TODAY, 2010, 15 (11-12) :444-450
[130]   Concepts of Artificial Intelligence for Computer-Assisted Drug Discovery [J].
Yang, Xin ;
Wang, Yifei ;
Byrne, Ryan ;
Schneider, Gisbert ;
Yang, Shengyong .
CHEMICAL REVIEWS, 2019, 119 (18) :10520-10594