First Detection of NADC34-like PRRSV as a Main Epidemic Strain on a Large Farm in China

被引:17
作者
Li, Chao [1 ]
Gong, Bangjun [1 ]
Sun, Qi [1 ]
Xu, Hu [1 ]
Zhao, Jing [1 ]
Xiang, Lirun [1 ]
Tang, Yan-Dong [1 ]
Leng, Chaoliang [2 ]
Li, Wansheng [1 ]
Guo, Zhenyang [1 ]
Fu, Jun [1 ]
Peng, Jinmei [1 ]
Wang, Qian [1 ]
Zhou, Guohui [1 ]
Yu, Ying [3 ]
Meng, Fandan [1 ]
An, Tongqing [1 ]
Cai, Xuehui [1 ]
Tian, Zhi-Jun [1 ]
Zhang, Hongliang [1 ]
机构
[1] Chinese Acad Agr Sci, Harbin Vet Res Inst, State Key Lab Vet Biotechnol, Harbin 150001, Peoples R China
[2] Nanyang Normal Univ, China UK NYNU RRes Joint Lab Insect Biol, Henan Prov Engn Lab Insects Bioreactor, Henan Key Lab Insect Biol Funiu Mt, Nanyang 473061, Peoples R China
[3] Qingdao Agr Univ, Coll Vet Med, Dept Prevent Vet Med, Qingdao 266109, Peoples R China
来源
PATHOGENS | 2022年 / 11卷 / 01期
基金
中国国家自然科学基金;
关键词
NADC34-like PRRSV; main epidemic strains; 100 aa deletion; RFLP; RESPIRATORY SYNDROME VIRUS; RFLP; 1-7-4; VIRUSES; SWINE-FEVER VIRUS; CHALLENGE; SEQUENCE; GENOME;
D O I
10.3390/pathogens11010032
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The newly emerged sublineage 1.5 (NADC34-like) porcine reproductive and respiratory syndrome virus (PRRSV) has posed a direct threat to the Chinese pig industry since 2018. However, the prevalence and impact of NADC34-like PRRSV on Chinese pig farms is unclear. In the present study, we continuously monitored pathogens-including PRRSV, African swine fever virus (ASFV), classical swine fever virus (CSFV), pseudorabies virus (PRV), and porcine circovirus 2 (PCV2)-on a fattening pig farm with strict biosecurity practices located in Heilongjiang Province, China, from 2020 to 2021. The results showed that multiple types of PRRSV coexisted on a single pig farm. NADC30-like and NADC34-like PRRSVs were the predominant strains on this pig farm. Importantly, NADC34-like PRRSV-detected during the period of peak mortality-was one of the predominant strains on this pig farm. Sequence alignment suggested that these strains shared the same 100 aa deletion in the NSP2 protein as IA/2014/NADC34 isolated from the United States (U.S.) in 2014. Phylogenetic analysis based on open reading frame 5 (ORF5) showed that the genetic diversity of NADC34-like PRRSV on this farm was relatively singular, but it had a relatively high rate of evolution. Restriction fragment length polymorphism (RFLP) pattern analysis showed that almost all ORF5 RFLPs were 1-7-4, with one 1-4-4. In addition, two complete genomes of NADC34-like PRRSVs were sequenced. Recombination analysis and sequence alignment demonstrated that both viruses, with 98.9% nucleotide similarity, were non-recombinant viruses. This study reports the prevalence and characteristics of NADC34-like PRRSVs on a large-scale breeding farm in northern China for the first time. These results will help to reveal the impact of NADC34-like PRRSVs on Chinese pig farms, and provide a reference for the detection and further prevention and control of NADC34-like PRRSVs.
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页数:11
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