Attheya (Bacillariophyta) from the northwestern Sea of Japan: a description of two subgenera based on molecular and morphological data

被引:1
作者
Stonik, Inna, V [1 ]
Efimova, Kseniya, V [1 ]
机构
[1] Russian Acad Sci, Natl Sci Ctr Marine Biol, Far Eastern Branch, Ul Palchevskogo 17, Vladivostok 690041, Russia
关键词
Diatoms; Morphology; Phylogeny; rDNA; Sea of Japan; SP-NOV BACILLARIOPHYTA; RIBOSOMAL-RNA; DNA TAXONOMY; DIATOMS; PHYLOGENY; EVOLUTION; ALIGNMENT; SUPPORT; LINEAGE; SIGNAL;
D O I
10.1080/00318884.2020.1732801
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Strains of the diatoms Attheya ussurensis, A. decora and A. longicornis, isolated from the northwestern Sea of Japan, were studied to infer their phylogeny and determine their systematic position. Morphological studies were conducted using light and transmission electron microscopy, and molecular analyses were based on nuclear-encoded small-subunit (18S) ribosomal DNA (rDNA) and ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) of the plastid gene. The strains studied, as well as sequences of A. longicornis and A. septentrionalis accessed from GenBank, belong to the class Mediophyceae. Molecular data confirmed that Attheya holds a basal position relative to the genera Biddulphia and Chaetoceros (Chaetocerotales). Thus, Attheya is a member of this lineage and not sister to Bacillariophyceae. Strains of Attheya belong to two clearly distinct lineages, differing in morphology and ecology. One lineage included strains of the type species of the genus, A. decora and the species A. ussurensis (psammophytes); the second lineage included the strains A. longicornis and A. septentrionalis (epiphytes or sea-ice diatoms). Morphologically, the two lineages differed in ratio of horn length to valve diameter, shape and number of plastids, presence/absence of girdle band perforation and presence/absence of rimoportula on the valve. Based on morphological and molecular data, we propose Attheya subgenus Attheya, to include A. decora, A. ussurensis, A.arenicola; and Attheya subgenus Dolichoceratia, to include A. longicornis, A. septentrionalis, A. flexuosa, A. gaussii and A. armata.
引用
收藏
页码:227 / 237
页数:11
相关论文
共 53 条
[1]   BASIC LOCAL ALIGNMENT SEARCH TOOL [J].
ALTSCHUL, SF ;
GISH, W ;
MILLER, W ;
MYERS, EW ;
LIPMAN, DJ .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) :403-410
[2]   Survey of Branch Support Methods Demonstrates Accuracy, Power, and Robustness of Fast Likelihood-based Approximation Schemes [J].
Anisimova, Maria ;
Gil, Manuel ;
Dufayard, Jean-Francois ;
Dessimoz, Christophe ;
Gascuel, Olivier .
SYSTEMATIC BIOLOGY, 2011, 60 (05) :685-699
[3]  
[Anonymous], 1895, BERICHTE DTSCH BOTAN
[4]  
[Anonymous], 1983, SANDY BEACHES ECOSYS, DOI DOI 10.1007/978-94-017-2938-3_26
[5]  
[Anonymous], 1977, NOVA HEDWIGIA S
[6]   REVISITING ROSS AND SIMS (1971): TOWARD A MOLECULAR PHYLOGENY OF THE BIDDULPHIACEAE AND EUPODISCACEAE (BACILLARIOPHYCEAE) [J].
Ashworth, Matt P. ;
Nakov, Teofil ;
Theriot, Edward C. .
JOURNAL OF PHYCOLOGY, 2013, 49 (06) :1207-1222
[7]   MORPHOLOGICAL AND GENETIC DIVERSITY OF BEAUFORT SEA DIATOMS WITH HIGH CONTRIBUTIONS FROM THE CHAETOCEROS NEOGRACILIS SPECIES COMPLEX [J].
Balzano, Sergio ;
Percopo, Isabella ;
Siano, Raffaele ;
Gourvil, Priscillia ;
Chanoine, Melanie ;
Marie, Dominique ;
Vaulot, Daniel ;
Sarno, Diana .
JOURNAL OF PHYCOLOGY, 2017, 53 (01) :161-187
[8]  
CASTROBUGALLO A, 2017, PHYLOGENETIC ANAL RE
[9]  
Chepurnov VA, 2004, PHYCOL RES, V52, P1
[10]  
Crawford Richard M., 1994, Diatom Research, V9, P27