On the Lambert W function and its utility in biochemical kinetics

被引:53
作者
Golicnik, Marko [1 ]
机构
[1] Univ Ljubljana, Fac Med, Inst Biochem, Ljubljana 1000, Slovenia
关键词
Biokinetics; Biosensors; Enzymes; Integrated rate equation; Kinetic parameters; Lambert W function; MICHAELIS-MENTEN EQUATION; PROGRESS-CURVE ANALYSIS; EXPLICIT ANALYTIC APPROXIMATIONS; ENDOGENOUS SUBSTRATE PRODUCTION; MASS-TRANSPORT; BIOSENSOR TECHNOLOGY; PARAMETER-ESTIMATION; REAL VALUES; ENZYME; MODEL;
D O I
10.1016/j.bej.2012.01.010
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
This article presents closed-form analytic solutions to three illustrative problems in biochemical kinetics that have usually been considered solvable only by various numerical methods. The problems solved concern two enzyme-catalyzed reaction systems that obey diversely modified Michaelis-Menten rate equations, and biomolecule surface binding that is limited by mass transport. These problems involve the solutions of transcendental equations that include products of variables and their logarithms. Such equations are solvable by the use of the Lambert W(x) function. Thus, these standard kinetics examples are solved in terms of W(x) to show the applicability of this commonly unknown function to the biochemical community. Hence, this review first of all describes the mathematical definition and properties of the W(x) function and its numerical evaluations, together with analytical approximations, and then it describes the use of the W(x) function in biochemical kinetics. Other applications of the function in various engineering sciences are also cited, although not described. (C) 2012 Elsevier B.V. All rights reserved.
引用
收藏
页码:116 / 123
页数:8
相关论文
共 53 条
[1]  
[Anonymous], 1993, Maple Tech. Newsl
[2]   Analytical approximations for real values of the Lambert W-function [J].
Barry, DA ;
Parlange, JY ;
Li, L ;
Prommer, H ;
Cunningham, CJ ;
Stagnitti, E .
MATHEMATICS AND COMPUTERS IN SIMULATION, 2000, 53 (1-2) :95-103
[3]   Green-Ampt approximations [J].
Barry, DA ;
Parlange, JY ;
Li, L ;
Jeng, DS ;
Crapper, M .
ADVANCES IN WATER RESOURCES, 2005, 28 (10) :1003-1009
[4]  
BARRY DA, 1995, ACM T MATH SOFTWARE, V21, P172, DOI 10.1145/203082.203088
[5]   Peptitergent PD1 affects the GTPase activity of rat brain cortical membranes [J].
Bavec, A ;
Juréus, A ;
Cigic, B ;
Langel, Ü ;
Zorko, M .
PEPTIDES, 1999, 20 (02) :177-184
[6]   COMPUTATION OF THE EXPLICIT SOLUTION TO THE MICHAELIS-MENTEN EQUATION [J].
BEAL, SL .
JOURNAL OF PHARMACOKINETICS AND BIOPHARMACEUTICS, 1983, 11 (06) :641-657
[7]   ON THE SOLUTION TO THE MICHAELIS-MENTEN EQUATION [J].
BEAL, SL .
JOURNAL OF PHARMACOKINETICS AND BIOPHARMACEUTICS, 1982, 10 (01) :109-119
[8]   Solution for the critical thickness models of dislocation generation in epitaxial thin films using the Lambert W function [J].
Belgacem, Chokri Hadj ;
Fnaiech, Mustapha .
JOURNAL OF MATERIALS SCIENCE, 2011, 46 (06) :1913-1915
[9]  
Berthier J, 2010, ARTECH HSE INTEGR MI, P1
[10]   Theoretical analysis of protein concentration determination using biosensor technology under conditions of partial mass transport limitation [J].
Christensen, LLH .
ANALYTICAL BIOCHEMISTRY, 1997, 249 (02) :153-164