Marine mimivirus relatives are probably large algal viruses

被引:91
作者
Monier, Adam [1 ]
Larsen, Jens Borggaard [2 ]
Sandaa, Ruth-Anne [2 ]
Bratbak, Gunnar [2 ]
Claverie, Jean-Michel [1 ]
Ogata, Hiroyuki [1 ]
机构
[1] CNRS, IBSM, UPR2589, Struct & Genom Informat Lab, F-13288 Marseille 9, France
[2] Univ Bergen, Dept Biol, N-5020 Bergen, Norway
关键词
D O I
10.1186/1743-422X-5-12
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Background: Acanthamoeba polyphaga mimivirus is the largest known ds-DNA virus and its 1.2 Mb-genome sequence has revealed many unique features. Mimivirus occupies an independent lineage among eukaryotic viruses and its known hosts include only species from the Acanthamoeba genus. The existence of mimivirus relatives was first suggested by the analysis of the Sargasso Sea metagenomic data. Results: We now further demonstrate the presence of numerous "mimivirus-like" sequences using a larger marine metagenomic data set. We also show that the DNA polymerase sequences from three algal viruses (CeV0I, PpV0I, PoV0I) infecting different marine algal species (Chrysochromulina ericina, Phaeocystis pouchetii, Pyramimonas orientalis) are very closely related to their homolog in mimivirus. Conclusion: Our results suggest that the numerous mimivirus-related sequences identified in marine environments are likely to originate from diverse large DNA viruses infecting phytoplankton. Micro-algae thus constitute a new category of potential hosts in which to look for new species of Mimiviridae.
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页数:8
相关论文
共 43 条
[1]   Virus-encoded Aminoacyl-tRNA synthetases:: Structural and functional characterization of mimivirus TyrRS and MetRS [J].
Abergel, Chantal ;
Rudinger-Thirion, Joelle ;
Giege, Richard ;
Claverie, Jean-Michel .
JOURNAL OF VIROLOGY, 2007, 81 (22) :12406-12417
[2]   Gapped BLAST and PSI-BLAST: a new generation of protein database search programs [J].
Altschul, SF ;
Madden, TL ;
Schaffer, AA ;
Zhang, JH ;
Zhang, Z ;
Miller, W ;
Lipman, DJ .
NUCLEIC ACIDS RESEARCH, 1997, 25 (17) :3389-3402
[3]  
[Anonymous], 2004, PHYLIP PHYLOGENY INF
[4]   OCEANOGRAPHIC CONDITIONS IN THE SANDSFJORD SYSTEM, WESTERN NORWAY, AFTER A BLOOM OF THE TOXIC PRYMNESIOPHYTE PRYMNESIUM-PARVUM CARTER IN AUGUST 1990 [J].
AURE, J ;
REY, F .
SARSIA, 1992, 76 (04) :247-254
[5]   Pfam 3.1: 1313 multiple alignments and profile HMMs match the majority of proteins [J].
Bateman, A ;
Birney, E ;
Durbin, R ;
Eddy, SR ;
Finn, RD ;
Sonnhammer, ELL .
NUCLEIC ACIDS RESEARCH, 1999, 27 (01) :260-262
[6]   Sex and the eukaryotic cell cycle is consistent with a viral ancestry for the eukaryotic nucleus [J].
Bell, Philip John Livingstone .
JOURNAL OF THEORETICAL BIOLOGY, 2006, 243 (01) :54-63
[7]  
Berger P, 2006, EMERG INFECT DIS, V12, P248
[8]   Isolation and characterization of a virus that infects Emiliania huxleyi (Haptophyta) [J].
Castberg, T ;
Thyrhaug, R ;
Larsen, A ;
Sandaa, RA ;
Heldal, M ;
Van Etten, JL ;
Bratbak, G .
JOURNAL OF PHYCOLOGY, 2002, 38 (04) :767-774
[9]   Evolutionary relationships among large double-stranded DNA viruses that infect microalgae and other organisms as inferred from DNA polymerase genes [J].
Chen, F ;
Suttle, CA .
VIROLOGY, 1996, 219 (01) :170-178
[10]   Viruses take center stage in cellular evolution [J].
Claverie, Jean-Michel .
GENOME BIOLOGY, 2006, 7 (06)