Crystallization and preliminary X-ray analysis of the NAD+-reducing [NiFe] hydrogenase from Hydrogenophilus thermoluteolus TH-1

被引:1
作者
Taketa, Midori [1 ,2 ]
Nakagawa, Hanae [1 ]
Habukawa, Mao [1 ]
Osuka, Hisao [1 ]
Kihira, Kiyohito [1 ]
Komori, Hirofumi [1 ,3 ]
Shibata, Naoki [1 ,3 ]
Ishii, Masaharu [4 ]
Igarashi, Yasuo [4 ]
Nishihara, Hirofumi [5 ]
Yoon, Ki-Seok [6 ]
Ogo, Seiji [6 ,7 ]
Shomura, Yasuhito [1 ,3 ]
Higuchi, Yoshiki [1 ,2 ,3 ]
机构
[1] Univ Hyogo, Dept Picobiol, Kamigori, Hyogo 6781297, Japan
[2] Japan & Sci Technol Agcy, CREST, Kawaguchi, Saitama 3320012, Japan
[3] RIKEN, SPring Ctr 8, Sayo, Hyogo 6795148, Japan
[4] Univ Tokyo, Dept Biotechnol, Bunkyo Ku, Tokyo 1138657, Japan
[5] Ibaraki Univ, Dept Bioresource Sci, Ami, Ibaraki 3000393, Japan
[6] Kyushu Univ, Int Inst Carbon Neutral Energy Res WPI I2CNER, Nishi Ku, Fukuoka 8190395, Japan
[7] Kyushu Univ, Dept Chem & Biochem, Nishi Ku, Fukuoka 8190395, Japan
来源
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS | 2015年 / 71卷
关键词
NAD(+)-reducing [NiFe] hydrogenase; hydrogen metabolism; diaphorase; respiratory complex I; RALSTONIA EUTROPHA H16; CRYSTAL-STRUCTURE; ESCHERICHIA-COLI; SUBUNITS; ENZYME; SITE;
D O I
10.1107/S2053230X14026521
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
NAD(+)-reducing [NiFe] hydrogenases catalyze the oxidoreduction of dihydrogen concomitant with the interconversion of NAD(+) and NADH. Here, the isolation, purification and crystallization of the NAD(+)-reducing [NiFe] hydrogenase from Hydrogenophilus thermoluteolus TH-1 are reported. Crystals of the NAD(+)-reducing [NiFe] hydrogenase were obtained within one week from a solution containing polyethylene glycol using the sitting-drop vapour-diffusion method and micro-seeding. The crystal diffracted to 2.58 angstrom resolution and belonged to space group C2, with unit-cell parameters a = 131.43, b = 189.71, c = 124.59 angstrom, = 109.42 degrees. Assuming the presence of two NAD(+)-reducing [NiFe] hydrogenase molecules in the asymmetric unit, V-M was calculated to be 2.2 angstrom(3)Da(-1), which corresponds to a solvent content of 43%. Initial phases were determined by the single-wavelength anomalous dispersion method using the anomalous signal from the Fe atoms.
引用
收藏
页码:96 / 99
页数:4
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