mRNA decay in prokaryotes and eukaryotes: Different approaches to a similar problem

被引:82
作者
Kushner, SR [1 ]
机构
[1] Univ Georgia, Dept Genet, Athens, GA 30602 USA
关键词
degradosome; endoribonucleases; exoribonucleases; Escherichia coli; exosome; polyadenylation; Saccharomyces cerevisiae;
D O I
10.1080/15216540400022441
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Over the past 15 years considerable progress has been made in understanding the molecular mechanisms of mRNA decay in both prokaryotes and eukaryotes. Interestingly, unlike other important biological reactions such as DNA replication and repair, many features of mRNA decay differ between prokaryotes or eukaryotes. Even when a particular enzyme like poly( A) polymerase has been conserved, polyadenylation of mRNAs in prokaryotes appears to serve a very different function than it does in eukaryotes. Furthermore, while mRNA degrading multiprotein complexes have been identified in both prokaryotes and eukaryotes, their composition and biochemical mechanisms are significantly different. Accordingly, this review seeks to provide a concise comparison of our current knowledge regarding the pathways of mRNA decay in two model organisms, the prokaryote Escherichia coli and the eukaryote Saccharomyces cerevisiae.
引用
收藏
页码:585 / 594
页数:10
相关论文
共 69 条
[1]   The yeast exosome and human PM-Scl are related complexes of 3′→5′ exonucleases [J].
Allmang, C ;
Petfalski, E ;
Podtelejnikov, A ;
Mann, M ;
Tollervey, D ;
Mitchell, P .
GENES & DEVELOPMENT, 1999, 13 (16) :2148-2158
[2]  
APIRION D, 1978, J BIOL CHEM, V253, P1738
[3]   STABILIZATION OF DISCRETE MESSENGER-RNA BREAKDOWN PRODUCTS IN AMS PNP RNB MULTIPLE MUTANTS OF ESCHERICHIA-COLI K-12 [J].
ARRAIANO, CM ;
YANCEY, SD ;
KUSHNER, SR .
JOURNAL OF BACTERIOLOGY, 1988, 170 (10) :4625-4633
[4]   ANALYSIS OF MESSENGER-RNA DECAY AND RIBOSOMAL-RNA PROCESSING IN ESCHERICHIA-COLI MULTIPLE MUTANTS CARRYING A DELETION IN RNASE-III [J].
BABITZKE, P ;
GRANGER, L ;
OLSZEWSKI, J ;
KUSHNER, SR .
JOURNAL OF BACTERIOLOGY, 1993, 175 (01) :229-239
[5]   Targeted mRNA degradation by deadenylation-independent decapping [J].
Badis, G ;
Saveanu, C ;
Fromont-Racine, M ;
Jacquier, A .
MOLECULAR CELL, 2004, 15 (01) :5-15
[6]   Ectopic RNase E sites promote bypass of 5′-end-dependent mRNA decay in Escherichia coli [J].
Baker, KE ;
Mackie, GA .
MOLECULAR MICROBIOLOGY, 2003, 47 (01) :75-88
[7]   DEGRADATION OF MESSENGER-RNA IN EUKARYOTES [J].
BEELMAN, CA ;
PARKER, R .
CELL, 1995, 81 (02) :179-183
[8]   Global analysis of Escherichia coli RNA degradosome function using DNA microarrays [J].
Bernstein, JA ;
Lin, PH ;
Cohen, SN ;
Lin-Chao, S .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (09) :2758-2763
[9]   MULTIPLE FUNCTIONS FOR POLY(A)-BINDING PROTEIN IN MESSENGER-RNA DECAPPING AND DEADENYLATION IN YEAST [J].
CAPONIGRO, G ;
PARKER, R .
GENES & DEVELOPMENT, 1995, 9 (19) :2421-2432
[10]   COPURIFICATION OF ESCHERICHIA-COLI RNASE-E AND PNPASE - EVIDENCE FOR A SPECIFIC ASSOCIATION BETWEEN 2 ENZYMES IMPORTANT IN RNA PROCESSING AND DEGRADATION [J].
CARPOUSIS, AJ ;
VANHOUWE, G ;
EHRETSMANN, C ;
KRISCH, HM .
CELL, 1994, 76 (05) :889-900