X-ray Structure-Guided Discovery of a Potent, Orally Bioavailable, Dual Human Indoleamine/Tryptophan 2,3-Dioxygenase (hIDO/hTDO) Inhibitor That Shows Activity in a Mouse Model of Parkinson's Disease

被引:15
作者
Ning, Xiang-Li [1 ]
Li, Yu-Zhi [2 ]
Huo, Cui [3 ]
Deng, Ji [1 ]
Gao, Cheng [3 ]
Zhu, Kai-Rong [1 ]
Wang, Miao [2 ]
Wu, Yu-Xiang [3 ]
Yu, Jun-Lin [1 ]
Ren, Ya-Li [2 ]
Luo, Zong-Yuan [3 ]
Li, Gen [1 ]
Chen, Yang [3 ]
Wang, Si-Yao [1 ]
Peng, Cheng [2 ]
Yang, Ling-Ling [3 ]
Wang, Zhou-Yu [3 ]
Wu, Yong [1 ]
Qian, Shan [3 ]
Li, Guo-Bo [1 ]
机构
[1] Sichuan Univ, West China Sch Pharm, Dept Med Chem, Educ Minist & Sichuan Prov,Key Lab Drug Targeting, Chengdu 610041, Peoples R China
[2] Chengdu Univ Tradit Chinese Med, Sch Pharm, State Key Lab Southwestern Chinese Med Resources, Chengdu 611137, Peoples R China
[3] Xihua Univ, Coll Food & Bioengn, Dept Pharmaceut Engn, Chengdu 610039, Peoples R China
基金
中国国家自然科学基金;
关键词
KYNURENINE PATHWAY; DRUG DISCOVERY; IDO1; TRYPTOPHAN; BRAIN; BINDING; OPTIMIZATION; DERIVATIVES; PREDICTION; RESISTANCE;
D O I
10.1021/acs.jmedchem.1c00303
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
Human indoleamine 2,3-dioxygenase 1 (hIDO1) and tryptophan 2,3-dioxygenase (hTDO) have been closely linked to the pathogenesis of Parkinson's disease (PD); nevertheless, development of dual hIDO1 and hTDO inhibitors to evaluate their potential efficacy against PD is still lacking. Here, we report biochemical, biophysical, and computational analyses revealing that 1H-indazole-4-amines inhibit both hIDO1 and hTDO by a mechanism involving direct coordination with the heme ferrous and ferric states. Crystal structure-guided optimization led to 23, which manifested IC50 values of 0.64 and 0.04 mu M to hIDO1 and hTDO, respectively, and had good pharmacokinetic properties and brain penetration in mice. 23 showed efficacy against the 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine-induced mouse motor coordination deficits, comparable to Madopar, an anti-PD medicine. Further studies revealed that different from Madopar, 23 likely has specific anti-PD mechanisms involving lowering IDO1 expression, alleviating dopaminergic neurodegeneration, reducing inflammatory cytokines and quinolinic acid in mouse brain, and increasing kynurenic acid in mouse blood.
引用
收藏
页码:8303 / 8332
页数:30
相关论文
共 76 条
  • [31] DNA-Encoded Library Technology-Based Discovery, Lead Optimization, and Prodrug Strategy toward Structurally Unique Indoleamine 2,3-Dioxygenase-1 (IDO1) Inhibitors
    Kazmierski, Wieslaw M.
    Xia, Bing
    Miller, John
    De la Rosa, Martha
    Favre, David
    Dunham, Richard M.
    Washio, Yoshiaki
    Zhu, Zhengrong
    Wang, Feng
    Mebrahtu, Makda
    Deng, Hongfeng
    Basilla, Jonathan
    Wang, Liping
    Evindar, Ghotas
    Fan, Lijun
    Olszewski, Alison
    Prabhu, Ninad
    Davie, Christopher
    Messer, Jeffrey A.
    Samano, Vicente
    [J]. JOURNAL OF MEDICINAL CHEMISTRY, 2020, 63 (07) : 3552 - 3562
  • [32] Protection of MPTP-induced neuroinflammation and neurodegeneration by Pycnogenol
    Khan, Mohammad Moshahid
    Kempuraj, Duraisamy
    Thangavel, Ramasamy
    Zaheer, Asgar
    [J]. NEUROCHEMISTRY INTERNATIONAL, 2013, 62 (04) : 379 - 388
  • [33] Current state on tryptophan 2,3-dioxygenase inhibitors: a patent review
    Kozlova, Arina
    Frederick, Raphael
    [J]. EXPERT OPINION ON THERAPEUTIC PATENTS, 2019, 29 (01) : 11 - 23
  • [34] Inhibition Mechanisms of Human Indoleamine 2,3 Dioxygenase 1
    Lewis-Ballester, Ariel
    Karkashon, Shay
    Batabyal, Dipanwita
    Poulos, Thomas L.
    Yeh, Syun-Ru
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2018, 140 (27) : 8518 - 8525
  • [35] Structural insights into substrate and inhibitor binding sites in human indoleamine 2,3-dioxygenase 1
    Lewis-Ballester, Ariel
    Pham, Khoa N.
    Batabyal, Dipanwita
    Karkashon, Shay
    Bonanno, Jeffrey B.
    Poulos, Thomas L.
    Yeh, Syun-Ru
    [J]. NATURE COMMUNICATIONS, 2017, 8
  • [36] MeLAD: an integrated resource for metalloenzyme-ligand associations
    Li, Gen
    Su, Yu
    Yan, Yu-Hang
    Peng, Jia-Yi
    Dai, Qing-Qing
    Ning, Xiang-Li
    Zhu, Cheng-Long
    Fu, Chen
    McDonough, Michael A.
    Schofield, Christopher J.
    Huang, Cheng
    Li, Guo-Bo
    [J]. BIOINFORMATICS, 2020, 36 (03) : 904 - 909
  • [37] IFPTarget: A Customized Virtual Target Identification Method Based on Protein-Ligand Interaction Fingerprinting Analyses
    Li, Guo-Bo
    Yu, Zhu-Jun
    Liu, Sha
    Huang, Lu-Yi
    Yang, Ling-Ling
    Lohans, Christopher T.
    Yang, Sheng-Yong
    [J]. JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2017, 57 (07) : 1640 - 1651
  • [38] Drug Discovery against Psoriasis: Identification of a New Potent FMS-like Tyrosine Kinase 3 (FLT3) Inhibitor, 1-(4-((1H-Pyrazolo[3,4-d]pyrimidin-4-yl)oxy)-3-fluorophenyl)-3-(5-(tert-butyl)isoxazol-3-yl)urea, That Showed Potent Activity in a Psoriatic Animal Model
    Li, Guo-Bo
    Ma, Shuang
    Yang, Ling-Ling
    Ji, Sen
    Fang, Zhen
    Zhang, Guo
    Wang, Li-Jiao
    Zhong, Jie-Min
    Xiong, Yu
    Wang, Jiang-Hong
    Huang, Shen-Zhen
    Li, Lin-Li
    Xiang, Rong
    Niu, Dawen
    Chen, Ying-Chun
    Yang, Sheng-Yong
    [J]. JOURNAL OF MEDICINAL CHEMISTRY, 2016, 59 (18) : 8293 - 8305
  • [39] LEADOPT: An automatic tool for structure-based lead optimization, and its application in structural optimizations of VEGFR2 and SYK inhibitors
    Li, Guo-Bo
    Ji, Sen
    Yang, Ling-Ling
    Zhang, Rong-Jie
    Chen, Kai
    Zhong, Lei
    Ma, Shuang
    Yang, Sheng-Yong
    [J]. EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 2015, 93 : 523 - 538
  • [40] ((S)-3-Mercapto-2-methylpropanamido)acetic acid derivatives as metallo-β-lactamase inhibitors: Synthesis, kinetic and crystallographic studies
    Liu, Sha
    Jing, Li
    Yu, Zhu-Jun
    Wu, Chengyong
    Zheng, Yongxiang
    Zhang, En
    Chen, Qiang
    Yu, Yamei
    Guo, Li
    Wu, Yong
    Li, Guo-Bo
    [J]. EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 2018, 145 : 649 - 660