An emergent clade of SARS-CoV-2 linked to returned travellers from Iran

被引：60

作者：

Eden, John-Sebastian ^{[1
,2
,3
,4
]}

Rockett, Rebecca ^{[1
,2
,5
,6
]}

Carter, Ian ^{[5
]}

Rahman, Hossinur ^{[5
]}

de Ligt, Joep ^{[7
]}

Hadfield, James ^{[8
]}

Storey, Matthew ^{[7
]}

Ren, Xiaoyun ^{[7
]}

Tulloch, Rachel ^{[1
,2
,3
,4
]}

Basile, Kerri ^{[5
]}

Wells, Jessica ^{[5
]}

Byun, Roy ^{[9
]}

Gilroy, Nicky ^{[5
]}

O'Sullivan, Matthew, V ^{[5
,6
]}

Sintchenko, Vitali ^{[1
,2
,5
,6
]}

Chen, Sharon C. ^{[1
,2
,5
,6
]}

Maddocks, Susan ^{[5
]}

Sorrell, Tania C. ^{[1
,2
,3
,4
,5
]}

Holmes, Edward C. ^{[1
,2
]}

Dwyer, Dominic E. ^{[1
,2
,5
,6
]}

Kok, Jen ^{[5
,6
]}

机构：

[1] Univ Sydney, Sch Life & Environm Sci, Marie Bashir Inst Infect Dis & Biosecur, Sydney, NSW 2006, Australia

[2] Univ Sydney, Sch Med Sci, Sydney, NSW 2006, Australia

[3] Westmead Inst Med Res, Ctr Virus Res, POB 412, Westmead, NSW 2145, Australia

[4] Westmead Inst Med Res, Ctr Infect Dis & Microbiol, POB 412, Westmead, NSW 2145, Australia

[5] NSW Hlth Pathol, Lab Serv, Ctr Infect Dis & Microbiol, Inst Clin Pathol & Med Res, Westmead, NSW 2145, Australia

[6] Westmead Hosp, Ctr Infect Dis & Microbiol Publ Hlth, Westmead, NSW 2145, Australia

[7] Inst Environm Sci & Res, Porirua 5240, New Zealand

[8] Fred Hutchinson Canc Res Ctr, Vaccine & Infect Dis Div, Seattle, WA 98109 USA

[9] NSW Minist Hlth, Sydney, NSW 2059, Australia

来源：

VIRUS EVOLUTION | 2020年 / 6卷 / 01期

基金：

澳大利亚国家健康与医学研究理事会;

关键词：

COVID-19; SARS-CoV-2; genome sequencing; phylogenetics;

D O I：

10.1093/ve/veaa027

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

The SARS-CoV-2 epidemic has rapidly spread outside China with major outbreaks occurring in Italy, South Korea, and Iran. Phylogenetic analyses of whole-genome sequencing data identified a distinct SARS-CoV-2 clade linked to travellers returning from Iran to Australia and New Zealand. This study highlights potential viral diversity driving the epidemic in Iran, and underscores the power of rapid genome sequencing and public data sharing to improve the detection and management of emerging infectious diseases.

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