Transcriptome Reveals the Dynamic Response Mechanism of Pearl Millet Roots under Drought Stress

被引:8
|
作者
Ji, Yang [1 ]
Lu, Xiaowen [2 ]
Zhang, Huan [2 ]
Luo, Dan [2 ]
Zhang, Ailing [2 ]
Sun, Min [2 ]
Wu, Qing [3 ]
Wang, Xiaoshan [2 ]
Huang, Linkai [2 ]
机构
[1] Sichuan Anim Sci Acad, Chengdu 610066, Peoples R China
[2] Sichuan Agr Univ, Coll Grassland Sci & Technol, Chengdu 611130, Peoples R China
[3] Sichuan Agr Univ, Dept Aquaculture, Coll Anim Sci & Technol, Chengdu 611130, Peoples R China
基金
中国国家自然科学基金;
关键词
pearl millet; root; transcriptome; plant hormone signal transduction; ABA; GENE-EXPRESSION; WATER-DEFICIT; ABA; PEROXIDASE; GROWTH; PLANTS; LEVEL; YIELD;
D O I
10.3390/genes12121988
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Drought is a major threat to global agricultural production that limits the growth, development and survival rate of plants, leading to tremendous losses in yield. Pearl millet (Cenchrus americanus (L.) Morrone) has an excellent drought tolerance, and is an ideal plant material for studying the drought resistance of cereal crops. The roots are crucial organs of plants that experience drought stress, and the roots can sense and respond to such conditions. In this study, we explored the mechanism of drought tolerance of pearl millet by comparing transcriptomic data under normal conditions and drought treatment at four time points (24 h, 48 h, 96 h, and 144 h) in the roots during the seedling stage. A total of 1297, 2814, 7401, and 14,480 differentially expressed genes (DEGs) were found at 24 h, 48 h, 96 h, and 144 h, respectively. Based on Kyoto Encyclopedia of Genes and Genomes and Gene Ontology enrichment analyses, we found that many DEGs participated in plant hormone-related signaling pathways and the "oxidoreductase activity" pathway. These results should provide a theoretical basis to enhance drought resistance in other plant species.
引用
收藏
页数:11
相关论文
共 50 条
  • [41] Transcriptome and Metabolome Integrated Analysis Reveals the Mechanism of Cinnamomum bodinieri Root Response to Alkali Stress
    Haozhang Han
    Lihua Zhang
    Suhua Li
    Rong Zhao
    Fang Wang
    Rong Dong
    Xiaoli Wang
    Plant Molecular Biology Reporter, 2023, 41 : 470 - 488
  • [42] De novo assembly and comparative transcriptome analysis of contrasting pearl millet (Pennisetum glaucum L.) genotypes under terminal drought stress using illumina sequencing
    Radha Shivhare
    Deepika Lakhwani
    Mehar H. Asif
    Puneet S. Chauhan
    Charu Lata
    The Nucleus, 2020, 63 : 341 - 352
  • [43] Integrated transcriptome and proteome analysis reveals complex regulatory mechanism of cotton in response to salt stress
    Chen Lin
    Sun Heng
    Kong Jie
    Xu Haijiang
    Yang Xiyan
    JOURNAL OF COTTON RESEARCH, 2021, 4 (01)
  • [44] De novo transcriptome in roots of switchgrass (Panicum virgatum L.) reveals gene expression dynamic and act network under alkaline salt stress
    Zhang, Pan
    Duo, Tianqi
    Wang, Fengdan
    Zhang, Xunzhong
    Yang, Zouzhuan
    Hu, Guofu
    BMC GENOMICS, 2021, 22 (01)
  • [45] Integrative transcriptome and metabolome analysis reveals the mechanism of fulvic acid alleviating drought stress in oat
    Zhu, Shanshan
    Mi, Junzhen
    Zhao, Baoping
    Wang, Zhaoming
    Yang, Zhixue
    Wang, Mengxin
    Liu, Jinghui
    FRONTIERS IN PLANT SCIENCE, 2024, 15
  • [46] Insights into drought stress response mechanism of tobacco during seed germination by integrated analysis of transcriptome and metabolome
    Ren, Xiaomin
    Yang, Chenkai
    Zhu, Xianxin
    Yi, Pengfei
    Jiang, Xizhen
    Yang, Jiashuo
    Xiang, Shipeng
    Li, Yunxia
    Yu, Bei
    Yan, Weijie
    Li, Xiaoxu
    Li, Yangyang
    Hu, Risheng
    Hu, Zhengrong
    PLANT PHYSIOLOGY AND BIOCHEMISTRY, 2024, 209
  • [47] Transcriptome profiling provide new insights into the molecular mechanism of grapevine response to heat, drought, and combined stress
    Ju, Yan-lun
    Min, Zhuo
    Zhang, Yang
    Zhang, Ke-kun
    Liu, Min
    Fang, Yu-lin
    SCIENTIA HORTICULTURAE, 2021, 286
  • [48] Physiological Characteristic Changes and Full-Length Transcriptome of Rose (Rosa chinensis) Roots and Leaves in Response to Drought Stress
    Li, Wei
    Fu, Lufeng
    Geng, Ziwen
    Zhao, Xiaojuan
    Liu, Qinghua
    Jiang, Xinqiang
    PLANT AND CELL PHYSIOLOGY, 2020, 61 (12) : 2153 - 2166
  • [49] Physiological and transcriptome analyses of Opisthopappus taihangensis in response to drought stress
    Gu, Huihui
    Yang, Yan
    Xing, Minghui
    Yue, Caipeng
    Wei, Fang
    Zhang, Yanjie
    Zhao, Wenen
    Huang, Jinyong
    CELL AND BIOSCIENCE, 2019, 9 (1):
  • [50] Transcriptome analysis reveals key drought-stress-responsive genes in soybean
    Li, Mingqian
    Li, Hainan
    Sun, Anni
    Wang, Liwei
    Ren, Chuanyou
    Liu, Jiang
    Gao, Xining
    FRONTIERS IN GENETICS, 2022, 13