Stretching single stranded DNA

被引:10
作者
Kumar, Sanjay [1 ]
Mishra, Garima [1 ]
机构
[1] Banaras Hindu Univ, Dept Phys, Varanasi 221005, Uttar Pradesh, India
关键词
LINEAR POLYMER-CHAIN; COLLAPSE TRANSITION; SURFACE-ADSORPTION; MOLECULE; FORCE; COIL; FAMILY; MECHANICS; BEHAVIOR; GLYOXAL;
D O I
10.1039/c0sm01110j
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Recently, single molecule force spectroscopy experiments provided much important information about the elastic properties of a single stranded DNA. Theoretical efforts, which followed these experiments could not provide satisfactory explanation for some of the observed results. For example, a decrease in the extension with temperature at high force, multi step transition in the force extension curve of poly(dA), etc. need further attention. In this brief review, we discuss a few of these experiments and illustrate that lattice models developed in the framework of statistical mechanics may describe some of the observed features. We also propose an experimental protocol, which may enable us to observe re-entrance, a long standing issue related to the force induced transitions of biopolymers.
引用
收藏
页码:4595 / 4605
页数:11
相关论文
共 86 条
  • [1] [Anonymous], 1980, BIOPHYS CHEM
  • [2] [Anonymous], 2003, Molecular Biology of the Gene
  • [3] Unzipping DNAs: towards the first step of replication
    Bhattacharjee, SM
    [J]. JOURNAL OF PHYSICS A-MATHEMATICAL AND GENERAL, 2000, 33 (45): : L423 - L428
  • [4] Single molecule study of the reaction between DNA and formamide
    Bhattacharyya, AJ
    Feingold, M
    [J]. TALANTA, 2001, 55 (05) : 943 - 949
  • [5] Bloomfield V., 2000, NUCL ACIDS STRUCTURE
  • [6] Molecular stick-slip motion revealed by opening DNA with piconewton forces
    Bockelmann, U
    EssevazRoulet, B
    Heslot, F
    [J]. PHYSICAL REVIEW LETTERS, 1997, 79 (22) : 4489 - 4492
  • [7] DNA strand separation studied by single molecule force measurements
    Bockelmann, U
    Essevaz-Roulet, B
    Heslot, F
    [J]. PHYSICAL REVIEW E, 1998, 58 (02): : 2386 - 2394
  • [8] Kinetics of conformational fluctuations in DNA hairpin-loops
    Bonnet, G
    Krichevsky, O
    Libchaber, A
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1998, 95 (15) : 8602 - 8606
  • [9] REACTION OF GLYOXAL WITH NUCLEIC ACID COMPONENTS .3. KINETICS OF REACTION WITH MONOMERS
    BROUDE, NE
    BUDOWSKY, EI
    [J]. BIOCHIMICA ET BIOPHYSICA ACTA, 1971, 254 (03) : 380 - &
  • [10] Effects of stacking on the configurations and elasticity of single-stranded nucleic acids
    Buhot, A
    Halperin, A
    [J]. PHYSICAL REVIEW E, 2004, 70 (02): : 4