Investigation of solvent effect and NMR shielding tensors of p53 tumor-suppressor gene in drug design

被引:5
|
作者
Irani, S. [1 ]
Monajjemi, M. [2 ]
Honarparvar, B. [2 ]
Atyabi, S. M. [3 ]
Sadeghizadeh, M. [4 ]
机构
[1] Islamic Azad Univ, Dept Biol, Sci & Res Branch, Tehran, Iran
[2] Islamic Azad Univ, Dept Chem, Sci & Res Branch, Tehran, Iran
[3] Islamic Azad Univ, Dept Med Engn, Sci & Res Branch, Tehran, Iran
[4] Tarbiat Modares Univ, Dept Genet, Sch Biol Sci, Tehran, Iran
来源
INTERNATIONAL JOURNAL OF NANOMEDICINE | 2011年 / 6卷
关键词
p53; CUA; mutation; ab initio method; NMR shielding; GAS-PHASE; URACIL; BASES; PROTONATION; SPECTRUM; ACIDITY; THYMINE; RNA;
D O I
10.2147/IJN.S14632
中图分类号
TB3 [工程材料学];
学科分类号
0805 ; 080502 ;
摘要
The p53 tumor-suppressor gene encodes a nuclear phosphoprotein with cancer-inhibiting properties. The most probable cancerous mutations occur as point mutations in exons 5 up to 8 of p53, as a base pair substitution that encompasses CUA and GAT sequences. As DNA drug design represents a direct genetic treatment of cancer, in the research reported computational drug design was carried out to explore, at the Hartree-Fock level, effects of solvents on the thermochemical properties and nuclear magnetic resonance (NMR) shielding tensors of some atoms of CUA involved in the hydrogen-bonding network. The observed NMR shielding variations of the solutes caused by solvent change seemed significant and were attributed to solvent polarity, and solute-solvent and solvent-solute hydrogen-bonding interactions. The results provide a reliable insight into the nature of mutation processes. However, to improve our knowledge of the hydration pattern more rigorous computations of the hydrated complexes are needed.
引用
收藏
页码:213 / 218
页数:6
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