共 14 条
Protein structure prediction servers at university college london
被引:598
作者:

Bryson, K
论文数: 0 引用数: 0
h-index: 0
机构:
UCL, Dept Comp Sci, London WC1E 6BT, England UCL, Dept Comp Sci, London WC1E 6BT, England

McGuffin, LJ
论文数: 0 引用数: 0
h-index: 0
机构:
UCL, Dept Comp Sci, London WC1E 6BT, England UCL, Dept Comp Sci, London WC1E 6BT, England

Marsden, RL
论文数: 0 引用数: 0
h-index: 0
机构:
UCL, Dept Comp Sci, London WC1E 6BT, England UCL, Dept Comp Sci, London WC1E 6BT, England

Ward, JJ
论文数: 0 引用数: 0
h-index: 0
机构:
UCL, Dept Comp Sci, London WC1E 6BT, England UCL, Dept Comp Sci, London WC1E 6BT, England

Sodhi, JS
论文数: 0 引用数: 0
h-index: 0
机构:
UCL, Dept Comp Sci, London WC1E 6BT, England UCL, Dept Comp Sci, London WC1E 6BT, England

Jones, DT
论文数: 0 引用数: 0
h-index: 0
机构:
UCL, Dept Comp Sci, London WC1E 6BT, England UCL, Dept Comp Sci, London WC1E 6BT, England
机构:
[1] UCL, Dept Comp Sci, London WC1E 6BT, England
基金:
英国惠康基金;
关键词:
D O I:
10.1093/nar/gki410
中图分类号:
Q5 [生物化学];
Q7 [分子生物学];
学科分类号:
071010 ;
081704 ;
摘要:
A number of state-of-the-art protein structure prediction servers have been developed by researchers working in the Bioinformatics Unit at University College London. The popular PSIPRED server allows users to perform secondary structure prediction, transmembrane topology prediction and protein fold recognition. More recent servers include DISOPRED for the prediction of protein dynamic disorder and DomPred for domain boundary prediction. These servers are available from our software home page at http://bioinf.cs.ucl.ac.uk/software.html.
引用
收藏
页码:W36 / W38
页数:3
相关论文
共 14 条
[1]
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
[J].
Altschul, SF
;
Madden, TL
;
Schaffer, AA
;
Zhang, JH
;
Zhang, Z
;
Miller, W
;
Lipman, DJ
.
NUCLEIC ACIDS RESEARCH,
1997, 25 (17)
:3389-3402

Altschul, SF
论文数: 0 引用数: 0
h-index: 0
机构: NHGRI, LAB GENET DIS RES, NIH, BETHESDA, MD 20892 USA

Madden, TL
论文数: 0 引用数: 0
h-index: 0
机构: NHGRI, LAB GENET DIS RES, NIH, BETHESDA, MD 20892 USA

Schaffer, AA
论文数: 0 引用数: 0
h-index: 0
机构: NHGRI, LAB GENET DIS RES, NIH, BETHESDA, MD 20892 USA

Zhang, JH
论文数: 0 引用数: 0
h-index: 0
机构: NHGRI, LAB GENET DIS RES, NIH, BETHESDA, MD 20892 USA

Zhang, Z
论文数: 0 引用数: 0
h-index: 0
机构: NHGRI, LAB GENET DIS RES, NIH, BETHESDA, MD 20892 USA

Miller, W
论文数: 0 引用数: 0
h-index: 0
机构: NHGRI, LAB GENET DIS RES, NIH, BETHESDA, MD 20892 USA

Lipman, DJ
论文数: 0 引用数: 0
h-index: 0
机构: NHGRI, LAB GENET DIS RES, NIH, BETHESDA, MD 20892 USA
[2]
CAFASP3: The third critical assessment of fully automated structure prediction methods
[J].
Fischer, D
;
Rychlewski, L
;
Dunbrack, RL
;
Ortiz, AR
;
Elofsson, A
.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS,
2003, 53
:503-516

Fischer, D
论文数: 0 引用数: 0
h-index: 0
机构:
Ben Gurion Univ Negev, Dept Comp Sci, IL-80415 Beer Sheva, Israel Ben Gurion Univ Negev, Dept Comp Sci, IL-80415 Beer Sheva, Israel

Rychlewski, L
论文数: 0 引用数: 0
h-index: 0
机构: Ben Gurion Univ Negev, Dept Comp Sci, IL-80415 Beer Sheva, Israel

Dunbrack, RL
论文数: 0 引用数: 0
h-index: 0
机构: Ben Gurion Univ Negev, Dept Comp Sci, IL-80415 Beer Sheva, Israel

Ortiz, AR
论文数: 0 引用数: 0
h-index: 0
机构: Ben Gurion Univ Negev, Dept Comp Sci, IL-80415 Beer Sheva, Israel

Elofsson, A
论文数: 0 引用数: 0
h-index: 0
机构: Ben Gurion Univ Negev, Dept Comp Sci, IL-80415 Beer Sheva, Israel
[3]
A MODEL RECOGNITION APPROACH TO THE PREDICTION OF ALL-HELICAL MEMBRANE-PROTEIN STRUCTURE AND TOPOLOGY
[J].
JONES, DT
;
TAYLOR, WR
;
THORTON, JM
.
BIOCHEMISTRY,
1994, 33 (10)
:3038-3049

JONES, DT
论文数: 0 引用数: 0
h-index: 0
机构:
NATL INST MED RES, MATH BIOL LAB, LONDON NW7 1AA, ENGLAND NATL INST MED RES, MATH BIOL LAB, LONDON NW7 1AA, ENGLAND

TAYLOR, WR
论文数: 0 引用数: 0
h-index: 0
机构:
NATL INST MED RES, MATH BIOL LAB, LONDON NW7 1AA, ENGLAND NATL INST MED RES, MATH BIOL LAB, LONDON NW7 1AA, ENGLAND

THORTON, JM
论文数: 0 引用数: 0
h-index: 0
机构:
NATL INST MED RES, MATH BIOL LAB, LONDON NW7 1AA, ENGLAND NATL INST MED RES, MATH BIOL LAB, LONDON NW7 1AA, ENGLAND
[4]
GenTHREADER: An efficient and reliable protein fold recognition method for genomic sequences
[J].
Jones, DT
.
JOURNAL OF MOLECULAR BIOLOGY,
1999, 287 (04)
:797-815

Jones, DT
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Warwick, Dept Biol Sci, Coventry CV4 7AL, W Midlands, England Univ Warwick, Dept Biol Sci, Coventry CV4 7AL, W Midlands, England
[5]
Protein secondary structure prediction based on position-specific scoring matrices
[J].
Jones, DT
.
JOURNAL OF MOLECULAR BIOLOGY,
1999, 292 (02)
:195-202

Jones, DT
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Warwick, Dept Biol Sci, Coventry CV4 7AL, W Midlands, England Univ Warwick, Dept Biol Sci, Coventry CV4 7AL, W Midlands, England
[6]
A NEW APPROACH TO PROTEIN FOLD RECOGNITION
[J].
JONES, DT
;
TAYLOR, WR
;
THORNTON, JM
.
NATURE,
1992, 358 (6381)
:86-89

JONES, DT
论文数: 0 引用数: 0
h-index: 0
机构:
NATL INST MED RES,MATH BIOL LAB,LONDON NW7 1AA,ENGLAND NATL INST MED RES,MATH BIOL LAB,LONDON NW7 1AA,ENGLAND

TAYLOR, WR
论文数: 0 引用数: 0
h-index: 0
机构:
NATL INST MED RES,MATH BIOL LAB,LONDON NW7 1AA,ENGLAND NATL INST MED RES,MATH BIOL LAB,LONDON NW7 1AA,ENGLAND

THORNTON, JM
论文数: 0 引用数: 0
h-index: 0
机构:
NATL INST MED RES,MATH BIOL LAB,LONDON NW7 1AA,ENGLAND NATL INST MED RES,MATH BIOL LAB,LONDON NW7 1AA,ENGLAND
[7]
Do transmembrane protein superfolds exist?
[J].
Jones, DT
.
FEBS LETTERS,
1998, 423 (03)
:281-285

Jones, DT
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Warwick, Dept Biol Sci, Coventry CV4 7AL, W Midlands, England Univ Warwick, Dept Biol Sci, Coventry CV4 7AL, W Midlands, England
[8]
Rapid protein domain assignment from amino acid sequence using predicted secondary structure
[J].
Marsden, RL
;
McGuffin, LJ
;
Jones, DT
.
PROTEIN SCIENCE,
2002, 11 (12)
:2814-2824

Marsden, RL
论文数: 0 引用数: 0
h-index: 0
机构: UCL, Bioinformat Unit, Dept Comp Sci, London WC1E 6BT, England

McGuffin, LJ
论文数: 0 引用数: 0
h-index: 0
机构: UCL, Bioinformat Unit, Dept Comp Sci, London WC1E 6BT, England

Jones, DT
论文数: 0 引用数: 0
h-index: 0
机构: UCL, Bioinformat Unit, Dept Comp Sci, London WC1E 6BT, England
[9]
Improvement of the GenTHREADER method for genomic fold recognition
[J].
McGuffin, LJ
;
Jones, DT
.
BIOINFORMATICS,
2003, 19 (07)
:874-881

McGuffin, LJ
论文数: 0 引用数: 0
h-index: 0
机构:
UCL, Dept Comp Sci, Bioinformat Grp, London WC1E 6BT, England UCL, Dept Comp Sci, Bioinformat Grp, London WC1E 6BT, England

Jones, DT
论文数: 0 引用数: 0
h-index: 0
机构:
UCL, Dept Comp Sci, Bioinformat Grp, London WC1E 6BT, England UCL, Dept Comp Sci, Bioinformat Grp, London WC1E 6BT, England
[10]
The PSIPRED protein structure prediction server
[J].
McGuffin, LJ
;
Bryson, K
;
Jones, DT
.
BIOINFORMATICS,
2000, 16 (04)
:404-405

McGuffin, LJ
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Warwick, Dept Biol Sci, Prot Bioinformat Grp, Coventry CV4 7AL, W Midlands, England Univ Warwick, Dept Biol Sci, Prot Bioinformat Grp, Coventry CV4 7AL, W Midlands, England

Bryson, K
论文数: 0 引用数: 0
h-index: 0
机构: Univ Warwick, Dept Biol Sci, Prot Bioinformat Grp, Coventry CV4 7AL, W Midlands, England

Jones, DT
论文数: 0 引用数: 0
h-index: 0
机构: Univ Warwick, Dept Biol Sci, Prot Bioinformat Grp, Coventry CV4 7AL, W Midlands, England