A robust holographic autofocusing criterion based on edge sparsity: Comparison of Gini index and Tamura coefficient for holographic autofocusing based on the edge sparsity of the complex optical wavefront

被引:11
作者
Tamamitsu, Miu [1 ,2 ,3 ]
Zhang, Yibo [1 ,2 ,3 ]
Wang, Hongda [1 ,2 ,3 ]
Wu, Yichen [1 ,2 ,3 ]
Ozcan, Aydogan [1 ,2 ,3 ,4 ]
机构
[1] Univ Calif Los Angeles, Elect & Comp Engn Dept, Los Angeles, CA 90095 USA
[2] Univ Calif Los Angeles, Bioengn Dept, Los Angeles, CA 90095 USA
[3] Univ Calif Los Angeles, Calif NanoSyst Inst CNSI, Los Angeles, CA 90095 USA
[4] Univ Calif Los Angeles, David Geffen Sch Med, Dept Surg, Los Angeles, CA 90095 USA
来源
QUANTITATIVE PHASE IMAGING IV | 2018年 / 10503卷
基金
美国国家卫生研究院; 美国国家科学基金会;
关键词
Optical imaging; Microscopy; Digital holography; Holographic autofocusing; Sparsity metric; ON-CHIP MICROSCOPY; DIGITAL HOLOGRAPHY; PHASE;
D O I
10.1117/12.2291179
中图分类号
O43 [光学];
学科分类号
070207 ; 0803 ;
摘要
The Sparsity of the Gradient (SoG) is a robust autofocusing criterion for holography, where the gradient modulus of the complex refocused hologram is calculated, on which a sparsity metric is applied. Here, we compare two different choices of sparsity metrics used in SoG, specifically, the Gini index (GI) and the Tamura coefficient (TC), for holographic autofocusing on dense/connected or sparse samples. We provide a theoretical analysis predicting that for uniformly distributed image data, TC and GI exhibit similar behavior, while for naturally sparse images containing few high-valued signal entries and many low-valued noisy background pixels, TC is more sensitive to distribution changes in the signal and more resistive to background noise. These predictions are also confirmed by experimental results using SoG-based holographic autofocusing on dense and connected samples (such as stained breast tissue sections) as well as highly sparse samples (such as isolated Giardia lamblia cysts). Through these experiments, we found that ToG and GoG offer almost identical autofocusing performance on dense and connected samples, whereas for naturally sparse samples, GoG should be calculated on a relatively small region of interest (ROI) closely surrounding the object, while ToG offers more flexibility in choosing a larger ROI containing more background pixels.
引用
收藏
页数:10
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