Rapid discrimination of newly isolated Bacillales with industrial applications using Raman spectroscopy
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作者:
Deng, A. H.
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Chinese Acad Sci, Inst Microbiol, Dept Ind Microbiol & Biotechnol, Beijing 100101, Peoples R ChinaChinese Acad Sci, Inst Microbiol, Dept Ind Microbiol & Biotechnol, Beijing 100101, Peoples R China
Deng, A. H.
[1
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Sun, Z. P.
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Chinese Acad Sci, Inst Microbiol, Dept Ind Microbiol & Biotechnol, Beijing 100101, Peoples R China
Chinese Acad Sci, Grad Univ, Beijing 100049, Peoples R ChinaChinese Acad Sci, Inst Microbiol, Dept Ind Microbiol & Biotechnol, Beijing 100101, Peoples R China
Sun, Z. P.
[1
,2
]
Zhang, G. Q.
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Chinese Acad Sci, Inst Microbiol, Dept Ind Microbiol & Biotechnol, Beijing 100101, Peoples R China
Chinese Acad Sci, Grad Univ, Beijing 100049, Peoples R ChinaChinese Acad Sci, Inst Microbiol, Dept Ind Microbiol & Biotechnol, Beijing 100101, Peoples R China
Zhang, G. Q.
[1
,2
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Wu, J.
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Chinese Acad Sci, Inst Microbiol, Dept Ind Microbiol & Biotechnol, Beijing 100101, Peoples R China
Chinese Acad Sci, Grad Univ, Beijing 100049, Peoples R ChinaChinese Acad Sci, Inst Microbiol, Dept Ind Microbiol & Biotechnol, Beijing 100101, Peoples R China
Wu, J.
[1
,2
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Wen, T. Y.
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Chinese Acad Sci, Inst Microbiol, Dept Ind Microbiol & Biotechnol, Beijing 100101, Peoples R ChinaChinese Acad Sci, Inst Microbiol, Dept Ind Microbiol & Biotechnol, Beijing 100101, Peoples R China
Wen, T. Y.
[1
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机构:
[1] Chinese Acad Sci, Inst Microbiol, Dept Ind Microbiol & Biotechnol, Beijing 100101, Peoples R China
[2] Chinese Acad Sci, Grad Univ, Beijing 100049, Peoples R China
Members of the bacterial order Bacillales have been of great interest for agricultural, horticultural, industrial and medical applications because of their capacity to produce various extracellular enzymes. One of the challenges for Bacillales study is to rapidly and effectively identify and characterize newly isolated strains. In the present study, Raman spectroscopy was performed to identify 14 Bacillales strains isolated from Tibet, China. The biochemical properties of each isolate were characterized, and several Raman bands corresponding to nucleic acids, proteins or saccharides were different between isolates. Multivariate analysis of 112 Raman spectra clearly revealed that all 14 isolates were clustered into 3 groups, which was in accordance with the phylogenetic analysis of their 16S rRNA genes. Our results suggest that Raman spectroscopy is an effective and promising approach that could quickly discriminate different phylogenetic groups of Bacillales. (C) 2012 by Astro, Ltd.
机构:
Tokyo Univ Agr & Technol, Grad Sch Agr, 3-5-8 Saiwai Cho, Fuchu, Tokyo 1838509, JapanTokyo Univ Agr & Technol, Grad Sch Agr, 3-5-8 Saiwai Cho, Fuchu, Tokyo 1838509, Japan
Saito, Kengo
Yamagata, Toru
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Tokyo Univ Agr & Technol, Grad Sch Agr, 3-5-8 Saiwai Cho, Fuchu, Tokyo 1838509, JapanTokyo Univ Agr & Technol, Grad Sch Agr, 3-5-8 Saiwai Cho, Fuchu, Tokyo 1838509, Japan
Yamagata, Toru
Kanno, Manami
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Nissenken Qual Evaluat Ctr, Tokyo Lab, Taito Ku, 2-16-11 Kuramae, Tokyo 1110051, JapanTokyo Univ Agr & Technol, Grad Sch Agr, 3-5-8 Saiwai Cho, Fuchu, Tokyo 1838509, Japan
Kanno, Manami
Yoshimura, Norio
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Tokyo Univ Agr & Technol, United Grad Sch Agr Sci, 3-5-8 Saiwa Cho, Fuchu, Tokyo 1838509, JapanTokyo Univ Agr & Technol, Grad Sch Agr, 3-5-8 Saiwai Cho, Fuchu, Tokyo 1838509, Japan
Yoshimura, Norio
Takayanagi, Masao
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Tokyo Univ Agr & Technol, United Grad Sch Agr Sci, 3-5-8 Saiwa Cho, Fuchu, Tokyo 1838509, JapanTokyo Univ Agr & Technol, Grad Sch Agr, 3-5-8 Saiwai Cho, Fuchu, Tokyo 1838509, Japan
机构:
Univ Calif Davis, Biophys Grad Grp, Davis, CA 95616 USA
Univ Calif Davis, NSF Ctr Biophoton Sci & Technol, Sacramento, CA 95817 USALawrence Livermore Natl Lab, Div Phys, Livermore, CA 94550 USA
Moritz, Tobias J.
Brunberg, James A.
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Univ Calif Davis, Med Ctr, Dept Radiol, Sacramento, CA 95817 USALawrence Livermore Natl Lab, Div Phys, Livermore, CA 94550 USA
Brunberg, James A.
Krol, Denise M.
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Univ Calif Davis, Biophys Grad Grp, Davis, CA 95616 USA
Univ Calif Davis, Dept Appl Sci, Davis, CA 95616 USALawrence Livermore Natl Lab, Div Phys, Livermore, CA 94550 USA
Krol, Denise M.
Wachsmann-Hogiu, Sebastian
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机构:
Univ Calif Davis, NSF Ctr Biophoton Sci & Technol, Sacramento, CA 95817 USA
Univ Calif Davis, Med Ctr, Dept Pathol & Lab Med, Sacramento, CA 95817 USALawrence Livermore Natl Lab, Div Phys, Livermore, CA 94550 USA
Wachsmann-Hogiu, Sebastian
Lane, Stephen M.
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Univ Calif Davis, NSF Ctr Biophoton Sci & Technol, Sacramento, CA 95817 USALawrence Livermore Natl Lab, Div Phys, Livermore, CA 94550 USA
Lane, Stephen M.
Chan, James W.
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Lawrence Livermore Natl Lab, Div Phys, Livermore, CA 94550 USA
Univ Calif Davis, NSF Ctr Biophoton Sci & Technol, Sacramento, CA 95817 USALawrence Livermore Natl Lab, Div Phys, Livermore, CA 94550 USA