System calibration method for Fourier ptychographic microscopy

被引:104
作者
Pan, An [1 ,2 ]
Zhang, Yan [1 ,2 ]
Zhao, Tianyu [1 ,2 ]
Wang, Zhaojun [1 ,2 ]
Dan, Dan [1 ,2 ]
Lei, Ming [1 ]
Yao, Baoli [1 ]
机构
[1] Chinese Acad Sci, Xian Inst Opt & Precis Mech, State Key Lab Transient Opt & Photon, Xian, Shaanxi, Peoples R China
[2] Univ Chinese Acad Sci, Beijing, Peoples R China
基金
中国国家自然科学基金;
关键词
computational imaging; phase retrieval; Fourier ptychography; LED ARRAY MICROSCOPE; ILLUMINATION; FIELD;
D O I
10.1117/1.JBO.22.9.096005
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Fourier ptychographic microscopy (FPM) is a recently proposed computational imaging technique with both high-resolution and wide field of view. In current FPM imaging platforms, systematic error sources come from aberrations, light-emitting diode (LED) intensity fluctuation, parameter imperfections, and noise, all of which may severely corrupt the reconstruction results with similar artifacts. Therefore, it would be unlikely to distinguish the dominating error from these degraded reconstructions without any preknowledge. In addition, systematic error is generally a mixture of various error sources in the real situation, and it cannot be separated due to their mutual restriction and conversion. To this end, we report a system calibration procedure, termed SC-FPM, to calibrate the mixed systematic errors simultaneously from an overall perspective, based on the simulated annealing algorithm, the LED intensity correction method, the nonlinear regression process, and the adaptive step-size strategy, which involves the evaluation of an error metric at each iteration step, followed by the re-estimation of accurate parameters. The performance achieved both in simulations and experiments demonstrates that the proposed method outperforms other state-of-the-art algorithms. The reported system calibration scheme improves the robustness of FPM, relaxes the experiment conditions, and does not require any preknowledge, which makes the FPM more pragmatic. (C) 2017 Society of Photo-Optical Instrumentation Engineers (SPIE)
引用
收藏
页数:11
相关论文
共 23 条
[1]   Motion-corrected Fourier ptychography [J].
Bian, Liheng ;
Zheng, Guoan ;
Guo, Kaikai ;
Suo, Jinli ;
Yang, Changhuei ;
Chen, Feng ;
Dai, Qionghai .
BIOMEDICAL OPTICS EXPRESS, 2016, 7 (11) :4543-4553
[2]   Fourier ptychographic reconstruction using Poisson maximum likelihood and truncated Wirtinger gradient [J].
Bian, Liheng ;
Suo, Jinli ;
Chung, Jaebum ;
Ou, Xiaoze ;
Yang, Changhuei ;
Chen, Feng ;
Dai, Qionghai .
SCIENTIFIC REPORTS, 2016, 6
[3]   Fourier ptychographic reconstruction using Wirtinger flow optimization [J].
Bian, Liheng ;
Suo, Jinli ;
Zheng, Guoan ;
Guo, Kaikai ;
Chen, Feng ;
Dai, Qionghai .
OPTICS EXPRESS, 2015, 23 (04) :4856-4866
[4]   Content adaptive illumination for Fourier ptychography [J].
Bian, Liheng ;
Suo, Jinli ;
Situ, Guohai ;
Zheng, Guoan ;
Chen, Feng ;
Dai, Qionghai .
OPTICS LETTERS, 2014, 39 (23) :6648-6651
[5]   Adaptive system correction for robust Fourier ptychographic imaging [J].
Bian, Zichao ;
Dong, Siyuan ;
Zheng, Guoan .
OPTICS EXPRESS, 2013, 21 (26) :32400-32410
[6]   U-shaped, double-tapered, fiber-optic sensor for effective biofilm growth monitoring [J].
Zhong, Nianbing ;
Zhao, Mingfu ;
Li, Yishan .
BIOMEDICAL OPTICS EXPRESS, 2016, 7 (02) :352-368
[7]   High-resolution fluorescence imaging via pattern-illuminated Fourier ptychography [J].
Dong, Siyuan ;
Nanda, Pariksheet ;
Shiradkar, Radhika ;
Guo, Kaikai ;
Zheng, Guoan .
OPTICS EXPRESS, 2014, 22 (17) :20856-20870
[8]   Spectral multiplexing and coherent-state decomposition in Fourier ptychographic imaging [J].
Dong, Siyuan ;
Shiradkar, Radhika ;
Nanda, Pariksheet ;
Zheng, Guoan .
BIOMEDICAL OPTICS EXPRESS, 2014, 5 (06) :1757-1767
[9]   An improved ptychographical phase retrieval algorithm for diffractive imaging [J].
Maiden, Andrew M. ;
Rodenburg, John M. .
ULTRAMICROSCOPY, 2009, 109 (10) :1256-1262
[10]   Aperture scanning Fourier ptychographic microscopy [J].
Ou, Xiaoze ;
Chung, Jaebum ;
Horstmeyer, Roarke ;
Yang, Changhuei .
BIOMEDICAL OPTICS EXPRESS, 2016, 7 (08) :3140-3150