A super-combo-drug test to detect adverse drug events and drug interactions from electronic health records in the era of polypharmacy

被引:2
作者
Zhu, Anqi [1 ]
Zeng, Donglin [1 ]
Shen, Li [2 ]
Ning, Xia [3 ]
Li, Lang [3 ]
Zhang, Pengyue [3 ]
机构
[1] Univ N Carolina, Dept Biostat, Chapel Hill, NC 27515 USA
[2] Univ Penn, Dept Biostat Epidemiol & Informat, Philadelphia, PA 19104 USA
[3] Ohio State Univ, Coll Med, Dept Biomed Informat, Columbus, OH 43210 USA
基金
美国国家卫生研究院;
关键词
adverse event; drug interaction; EHR; pharmacoinformatics; SupCD-T; SIGNAL-DETECTION; RESPONSE MODEL; MYOPATHY; FREQUENCY;
D O I
10.1002/sim.8490
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Pharmacoinformatics research has experienced a great deal of successes in detecting drug-induced adverse events (AEs) using large-scale health record databases. In the era of polypharmacy, pharmacoinformatics faces many new challenges, and two significant challenges are to detect high-order drug interactions and to handle strongly correlated drugs. In this article, we propose a super-combo-drug test (SupCD-T) to address the aforementioned two challenges. SupCD-T detects drug interactions by identifying optimal drug combinations with increased AE risks. In addition, SupCD-T increases the statistical powers to detect single-drug effects by combining strongly correlated drugs. Although SupCD-T does not distinguish single-drug effects from their combination effects, it is noticeably more powerful in selecting an individual drug effect in the multiple regression analysis, where confounding justification between two correlated drugs reduces the power in testing the individual drug effects on AEs. Our simulation studies demonstrate that SupCD-T has generally better power comparing with the multiple regression analysis. In addition, SupCD-T is able to select meaningful drug combinations (eg, highly coprescribed drugs). Using electronic health record database, we illustrate the utility of SupCD-T and discover a number of drug combinations that have increased risk in myopathy. Some novel drug combinations have not yet been investigated and reported in the pharmacology research.
引用
收藏
页码:1458 / 1472
页数:15
相关论文
共 25 条
  • [1] Phenotype Standardization for Statin-Induced Myotoxicity
    Alfirevic, A.
    Neely, D.
    Armitage, J.
    Chinoy, H.
    Cooper, R. G.
    Laaksonen, R.
    Carr, D. F.
    Bloch, K. M.
    Fahy, J.
    Hanson, A.
    Yue, Q-Y
    Wadelius, M.
    Maitland-van der Zee, A. H.
    Voora, D.
    Psaty, B. M.
    Palmer, C. N. A.
    Pirmohamed, M.
    [J]. CLINICAL PHARMACOLOGY & THERAPEUTICS, 2014, 96 (04) : 470 - 476
  • [2] Disproportionality analysis using empirical Bayes data mining: a tool for the evaluation of drug interactions in the post-marketing setting
    Almenoff, JS
    DuMouchel, W
    Kindman, LA
    Yang, XH
    Fram, D
    [J]. PHARMACOEPIDEMIOLOGY AND DRUG SAFETY, 2003, 12 (06) : 517 - 521
  • [3] [Anonymous], 2016, 2015 SPEC FEAT RAC E
  • [4] Hospitalisations and emergency department visits due to drug-drug interactions: a literature review
    Becker, Matthijs L.
    Kallewaard, Marjon
    Caspers, Peter W. J.
    Visser, Loes E.
    Leufkens, Hubert G. M.
    Stricker, Bruno HCh
    [J]. PHARMACOEPIDEMIOLOGY AND DRUG SAFETY, 2007, 16 (06) : 641 - 651
  • [5] Translational High-Dimensional Drug Interaction Discovery and Validation Using Health Record Databases and Pharmacokinetics Models
    Chiang, Chien-Wei
    Zhang, Pengyue
    Wang, Xueying
    Wang, Lei
    Zhang, Shijun
    Ning, Xia
    Shen, Li
    Quinney, Sara K.
    Li, Lang
    [J]. CLINICAL PHARMACOLOGY & THERAPEUTICS, 2018, 103 (02) : 287 - 295
  • [6] Adverse drug events in hospitalized patients - Excess length of stay, extra costs, and attributable mortality
    Classen, DC
    Pestotnik, SL
    Evans, RS
    Lloyd, JF
    Burke, JP
    [J]. JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION, 1997, 277 (04): : 301 - 306
  • [7] Graphic Mining of High-Order Drug Interactions and Their Directional Effects on Myopathy Using Electronic Medical Records
    Du, L.
    Chakraborty, A.
    Chiang, C-W
    Cheng, L.
    Quinney, S. K.
    Wu, H.
    Zhang, P.
    Li, L.
    Shen, L.
    [J]. CPT-PHARMACOMETRICS & SYSTEMS PHARMACOLOGY, 2015, 4 (08): : 481 - 488
  • [8] Literature Based Drug Interaction Prediction with Clinical Assessment Using Electronic Medical Records: Novel Myopathy Associated Drug Interactions
    Duke, Jon D.
    Han, Xu
    Wang, Zhiping
    Subhadarshini, Abhinita
    Karnik, Shreyas D.
    Li, Xiaochun
    Hall, Stephen D.
    Jin, Yan
    Callaghan, J. Thomas
    Overhage, Marcus J.
    Flockhart, David A.
    Strother, R. Matthew
    Quinney, Sara K.
    Li, Lang
    [J]. PLOS COMPUTATIONAL BIOLOGY, 2012, 8 (08)
  • [9] DuMouchel W, 1999, AM STAT, V53, P177, DOI 10.2307/2686093
  • [10] Hamilton RA, 1998, PHARMACOTHERAPY, V18, P1112