Comprehensive analysis of pan-cancer reveals potential of ASF1B as a prognostic and immunological biomarker

被引:36
作者
Hu, Xinyao [1 ,2 ]
Zhu, Hua [3 ]
Zhang, Xiaoyu [1 ]
He, Xiaoqin [1 ,2 ]
Xu, Ximing [1 ,2 ]
机构
[1] Wuhan Univ, Dept Oncol, Renmin Hosp, Wuhan, Peoples R China
[2] Wuhan Univ, Canc Ctr, Renmin Hosp, Wuhan, Peoples R China
[3] Wuhan Univ, Dept Neurosurg, Renmin Hosp, Wuhan, Peoples R China
基金
中国国家自然科学基金;
关键词
ASF1B; MSI; pan-cancer; prognosis; TMB; tumor immunity; PROGRESSION; EXPRESSION; PROMOTES;
D O I
10.1002/cam4.4203
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Background Anti-silencing function 1 (ASF1) is a conserved histone H3-H4 chaperone protein. ASF1B, a paralog of ASF1, acts by promoting cell proliferation and influencing cell cycle progression. Although there is some evidence demonstrating that ASF1B plays a key role in the development, progression, and prognosis of certain cancers, there are no pan-cancer analyses of ASF1B. Methods We used a range of bioinformatics approaches to investigate the predictive role of ASF1B, including its correlation with prognosis, tumor mutational burden (TMB), microsatellite instability (MSI), tumor microenvironment (TME), and immune cell infiltration, in diverse cancer types. Results We found that ASF1B was highly expressed in 22 cancers and was negatively correlated with the prognosis of multiple major cancer types. Furthermore, ASF1B expression was correlated with TMB in 21 cancers and with MSI in 7 cancers. We found that ASF1B was coexpressed with genes encoding immune activators, immune suppressors, major histocompatibility complexes, chemokines, and chemokine receptors. We further found that the role of ASF1B in the infiltration of different types of immune cells varied across tumor types. ASF1B may potentially affect several key immune-related pathways, such as those involved in antigen processing and presentation, natural killer cell-mediated cytotoxicity, and autoimmune thyroid disease. Conclusions Our findings show that ASF1B may serve as a prognostic marker and potential immunotherapeutic target for several malignancies due to its role in tumorigenesis and immune infiltration.
引用
收藏
页码:6897 / 6916
页数:20
相关论文
共 32 条
[11]   Transcriptomic analysis reveals the oncogenic role of S6K1 in hepatocellular carcinoma [J].
Lai, Keng Po ;
Cheung, Angela ;
Ho, Cheuk Hin ;
Tam, Nathan Yi-Kan ;
Li, Jing Woei ;
Lin, Xiao ;
Chan, Ting Fung ;
Lee, Nikki Pui-Yue ;
Li, Rong .
JOURNAL OF CANCER, 2020, 11 (09) :2645-2655
[12]   Immune cells within the tumor microenvironment: Biological functions and roles in cancer immunotherapy [J].
Lei, Xu ;
Lei, Yu ;
Li, Jin-Ke ;
Du, Wei-Xing ;
Li, Ru-Gui ;
Yang, Jing ;
Li, Jian ;
Li, Fang ;
Tan, Hua-Bing .
CANCER LETTERS, 2020, 470 :126-133
[13]   Crosstalk Between the MSI Status and Tumor Microenvironment in Colorectal Cancer [J].
Lin, Anqi ;
Zhang, Jian ;
Luo, Peng .
FRONTIERS IN IMMUNOLOGY, 2020, 11
[14]   Combination of TMB and CNA Stratifies Prognostic and Predictive Responses to Immunotherapy Across Metastatic Cancer [J].
Liu, Li ;
Bai, Xue ;
Wang, Jian ;
Tang, Xin-Ran ;
Wu, De-Hua ;
Du, Sha-Sha ;
Du, Xiu-Ju ;
Zhang, Yao-Wei ;
Zhu, Hong-Bo ;
Fang, Yuan ;
Guo, Ze-Qin ;
Zeng, Qin ;
Guo, Xue-Jun ;
Liu, Zhu ;
Dong, Zhong-Yi .
CLINICAL CANCER RESEARCH, 2019, 25 (24) :7413-7423
[15]   ASF1B promotes cervical cancer progression through stabilization of CDK9 [J].
Liu, Xinjian ;
Song, Jingwei ;
Zhang, Yenan ;
Wang, Huiquan ;
Sun, Hongzhi ;
Feng, Xiaomin ;
Hou, Min ;
Chen, Guo ;
Tang, Qi ;
Ji, Minjun .
CELL DEATH & DISEASE, 2020, 11 (08)
[16]   Loss of the histone chaperone ASF1B reduces female reproductive capacity in mice [J].
Messiaen, S. ;
Guiard, J. ;
Aigueperse, C. ;
Fliniaux, I. ;
Tourpin, S. ;
Barroca, V. ;
Allemand, I. ;
Fouchet, P. ;
Livera, G. ;
Vernet, M. .
REPRODUCTION, 2016, 151 (05) :477-489
[17]  
Newman AM, 2015, NAT METHODS, V12, P453, DOI [10.1038/NMETH.3337, 10.1038/nmeth.3337]
[18]   Histone chaperone ASF1B promotes human -cell proliferation via recruitment of histone H3.3 [J].
Paul, Pradyut K. ;
Rabaglia, Mary E. ;
Wang, Chen-Yu ;
Stapleton, Donald S. ;
Leng, Ning ;
Kendziorski, Christina ;
Lewis, Peter W. ;
Keller, Mark P. ;
Attie, Alan D. .
CELL CYCLE, 2016, 15 (23) :3191-3202
[19]   The Tumor Microenvironment in the Response to Immune Checkpoint Blockade Therapies [J].
Petitprez, Florent ;
Meylan, Maxime ;
de Reynies, Aurelien ;
Sautes-Fridman, Catherine ;
Fridman, Wolf H. .
FRONTIERS IN IMMUNOLOGY, 2020, 11
[20]   Microenvironmental regulation of tumor progression and metastasis [J].
Quail, Daniela F. ;
Joyce, Johanna A. .
NATURE MEDICINE, 2013, 19 (11) :1423-1437