Actinokineospora baliensis sp. nov., Actinokineospora cibodasensis sp. nov and Actinokineospora cianjurensis sp. nov., isolated from soil and plant litter

被引:22
作者
Lisdiyanti, Puspita [1 ]
Otoguro, Misa [2 ]
Ratnakomala, Shanti [1 ]
Lestari, Yulin [3 ]
Hastuti, Ratih D. [4 ]
Triana, Evi [5 ]
Katsuhiko, Ando [2 ]
Widyastuti, Yantyati [1 ]
机构
[1] Indonesian Inst Sci, Biotechnol Res Ctr, Cibinong 16911, Indonesia
[2] Natl Inst Technol & Evaluat, Dept Biotechnol, Chiba 2920818, Japan
[3] Bogor Agr Univ, Dept Biol, Fac Math & Nat Sci, Bogor 16144, Indonesia
[4] Soil Res Inst, Bogor 16002, Indonesia
[5] Indonesian Inst Sci, Biol Res Ctr, Cibinong 16911, Indonesia
关键词
SELECTIVE ISOLATION; GENUS ACTINOKINEOSPORA; PHYLOGENETIC ANALYSIS; COMB-NOV; EVOLUTION;
D O I
10.1099/ijs.0.013276-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Six actinomycete strains isolated from soil and plant-litter samples in Indonesia were studied for their taxonomic position by using a polyphasic approach. Phylogenetically, all the strains were located in the broad cluster of the genus Actinokineospora. Chemotaxonomic data [cell-wall diamino acid, meso-diaminopimelic acid; cell-wall peptidoglycan, type III (A1 gamma); major sugars, galactose and arabinose; major menaquinone, MK-9(H-4); major fatty acid, iso-C-16:0; major phospholipid, phosphatidylethanolamine] supported the affiliation of all six strains to the genus Actinokineospora. The results of DNA DNA hybridization with DNA from type strains of Actinokineospora species with validly published names revealed three DNA DNA relatedness groups. Group I (ID03-0561(T)) showed low relatedness to the other strains studied. The three strains in group II (ID03-0784(T), ID03-0808 and ID03-0809) formed a group with high relatedness (98-100%) and showed low relatedness to the other strains studied. The two strains in group III (ID03-0810(T) and ID03-0813) showed 58-68% relatedness to Actinokineospora terrae NBRC 15668(T) and showed low relatedness (2-24%) to the other strains studied. The description of three novel species is proposed: Actinokineospora baliensis sp. nov., for the single strain in group I (type strain ID03-0561(T) =BTCC B-554(T) =NBRC 104211(T)), Actinokineospora cibodasensis sp. nov., for the strains in group II (type strain ID03-0784(T) =BTCC B-555(T) =NBRC 104212(T)), and Actinokineospora cianjurensis sp. nov., for the strains in group III (type strain ID03-0810(T) =BTCC B-558(T) =NBRC 105526(T)).
引用
收藏
页码:2331 / 2335
页数:5
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