Synthesis, spectroscopy and crystal structure characterization, Hirshfeld surface analysis and energy framework calculations of 1-acetyl-5-(2-(methylthio) ethyl)-2-thioxoimidazolidin-4-one

被引:10
作者
Hernandez, Benjamin [1 ]
Narea, Pilar [1 ]
Cisterna, Jonathan [1 ]
Maxwell, Lindley [1 ]
Cardenas, Alejandro [2 ]
Brito, Ivan [1 ]
Delgado, Gerzon E. [1 ,3 ]
机构
[1] Univ Antofagasta, Fac Ciencias Basicas, Dept Quim, Campus Coloso, Antofagasta 1240000, Chile
[2] Univ Antofagasta, Fac Ciencias Basicas, Dept Fis, Campus Coloso, Antofagasta 1240000, Chile
[3] Univ Los Andes, Fac Ciencias, Dept Quim, Lab Cristalog, Merida 5101, Venezuela
关键词
Thiohydantoin; X-ray crystal structure; Hydrogen bonds; Hirshfeld surface; Energy frameworks; Topology; HYDROGEN-BOND PATTERNS; CANCER; CHEMISTRY; INSIGHTS; VAN;
D O I
10.1016/j.molstruc.2021.131070
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
A new thiohydantoin compound with formula C8H12N2O2S2 has been synthesized and structurally characterized by FT-IR, MS, H-1-NMR and C-13-NMR spectroscopy, and single-crystal X-ray diffraction analysis. 1-acetyl-5-(2-(methylthio)ethyl)-2-thioxoimidazolidin-4-one (1) crystallizes in the monoclinic space group P2/n, with two independent molecules, R and S , in the asymmetric unit. The molecular structure and crystal packing of (1) are stabilized by intermolecular N-H center dot center dot center dot O hydrogen bonds in both molecules, which formed infinite one-dimensional chains, with graph-set C(6), that run along [010] direction parallel to each other. Hirshfeld surface analysis reveals that the most important contributions for the crystal packing are from H center dot center dot H interactions. Energy framework calculations suggest that the contacts formed between molecules are slightly dispersive. The topological analysis indicated that the crystal structure displays a topology TCF-x. (C) 2021 Elsevier B.V. All rights reserved.
引用
收藏
页数:8
相关论文
共 47 条
[1]   TABLES OF BOND LENGTHS DETERMINED BY X-RAY AND NEUTRON-DIFFRACTION .1. BOND LENGTHS IN ORGANIC-COMPOUNDS [J].
ALLEN, FH ;
KENNARD, O ;
WATSON, DG ;
BRAMMER, L ;
ORPEN, AG ;
TAYLOR, R .
JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2, 1987, (12) :S1-S19
[2]  
Baeyer A., 1861, LIEBIGS ANN CHEM, V117, P178, DOI DOI 10.1002/JLAC.18611170204
[3]   Van der Waals radii of elements [J].
Batsanov, SS .
INORGANIC MATERIALS, 2001, 37 (09) :871-885
[4]   Vertex-, face-, point-, Schlafli-, and Delaney-symbols in nets, polyhedra and tilings: recommended terminology [J].
Blatov, V. A. ;
O'Keeffe, M. ;
Proserpio, D. M. .
CRYSTENGCOMM, 2010, 12 (01) :44-48
[5]   Applied Topological Analysis of Crystal Structures with the Program Package ToposPro [J].
Blatov, Vladislav A. ;
Shevchenko, Alexander P. ;
Proserpio, Davide M. .
CRYSTAL GROWTH & DESIGN, 2014, 14 (07) :3576-3586
[6]   VAN DER WAALS VOLUMES + RADII [J].
BONDI, A .
JOURNAL OF PHYSICAL CHEMISTRY, 1964, 68 (03) :441-+
[7]  
Bruker AXS IncAPEX3 Package, 2016, APEX3 SAINT SADABS
[8]   1-acetyl-2-thiohydantoin [J].
Casas, JS ;
Castineiras, A ;
Couce, D ;
Playa, N ;
Sordo, J ;
Varela, JM .
ACTA CRYSTALLOGRAPHICA SECTION C-CRYSTAL STRUCTURE COMMUNICATIONS, 1998, 54 :427-428
[9]   Dual mechanisms of action of the 5-benzylidene-hydantoin UPR1024 on lung cancer cell lines [J].
Cavazzoni, Andrea ;
Alfieri, Roberta R. ;
Carmi, Caterina ;
Zuliani, Valentina ;
Galetti, Maricla ;
Fumarola, Claudia ;
Frazzi, Raffaele ;
Bonelli, Mara ;
Bordi, Fabrizio ;
Lodola, Alessio ;
Mor, Marco ;
Petronini, Pier Giorgio .
MOLECULAR CANCER THERAPEUTICS, 2008, 7 (02) :361-370
[10]  
Delgado G.E., 2014, AV QUIM, V9, P3