Detection of miRNAs with a nanopore single-molecule counter

被引:0
|
作者
Gu, Li-Qun [1 ]
Wanunu, Meni [2 ]
Wang, Michael X. [3 ]
McReynolds, Larry [4 ]
Wang, Yong [1 ]
机构
[1] Univ Missouri, Dalton Cardiovasc Res Ctr, Columbia, MO 65211 USA
[2] Northeastern Univ, Dept Phys & Chem Chem Biol, Nanoscale Biophys Lab, Boston, MA 02115 USA
[3] Univ Missouri, Dept Pathol & Anat Sci, Ellis Fischel Canc Ctr, Columbia, MO 65203 USA
[4] New England Biolabs Inc, Div RNA Biol, Ipswich, MA 01938 USA
基金
美国国家科学基金会; 美国国家卫生研究院;
关键词
biomarker; biosensor; diagnostics; lung cancer; miRNA; nanopore; noninvasive detection; PCR; IN-SITU DETECTION; MICRORNA EXPRESSION PROFILES; SEQUENCE-SPECIFIC DETECTION; INDIVIDUAL DNA STRANDS; FORMALIN-FIXED TISSUES; CELL LUNG-CANCER; ALPHA-HEMOLYSIN; ORIENTATION DISCRIMINATION; CIRCULATING MICRORNAS; SMALL RNAS;
D O I
10.1586/ERM.12.58
中图分类号
R36 [病理学];
学科分类号
100104 ;
摘要
miRNAs are short noncoding RNA molecules that are important in regulating gene expression. Due to the correlation of their expression levels and various diseases, miRNAs are being investigated as potential biomarkers for molecular diagnostics. The fast-growing miRNA exploration demands rapid, accurate, low-cost miRNA detection technologies. This article will focus on two platforms of nanopore single-molecule approach that can quantitatively measure miRNA levels in samples from tissue and cancer patient plasma. Both nanopore methods are sensitive and specific, and do not need labeling, enzymatic reaction or amplification. In the next 5 years, the nanopore-based miRNA techniques will be improved and validated for noninvasive and early diagnosis of diseases.
引用
收藏
页码:573 / 584
页数:12
相关论文
共 50 条
  • [21] Nanopore single-molecule biosensor in protein denaturation analysis
    Sun, Hong
    Yao, Chuan
    You, Kaibo
    Chen, Can
    Liu, Shuoshuo
    Xu, Zhihong
    ANALYTICA CHIMICA ACTA, 2023, 1243
  • [22] Learning Shapelets for Improving Single-Molecule Nanopore Sensing
    Wei, Zi-Xuan
    Ying, Yi-Lun
    Li, Meng-Yin
    Yang, Jie
    Zhou, Jia-Le
    Wang, Hui-Feng
    Yang, Bing-Yong
    Long, Yi-Tao
    ANALYTICAL CHEMISTRY, 2019, 91 (15) : 10033 - 10039
  • [23] Single-molecule detection of folding and unfolding of the G-quadruplex aptamer in a nanopore nanocavity
    Shim, Ji Wook
    Tan, Qiulin
    Gu, Li-Qun
    NUCLEIC ACIDS RESEARCH, 2009, 37 (03) : 972 - 982
  • [24] Selective Single-Molecule Nanopore Detection of mpox A29 Protein Directly in Biofluids
    Cai, Shenglin
    Ren, Ren
    He, Jiaxuan
    Wang, Xiaoyi
    Zhang, Zheng
    Luo, Zhaofeng
    Tan, Weihong
    Korchev, Yuri
    Edel, Joshua B.
    Ivanov, Aleksandar P.
    NANO LETTERS, 2023, 23 (24) : 11438 - 11446
  • [25] Mechanistic Study of the Conductance and Enhanced Single-Molecule Detection in a Polymer-Electrolyte Nanopore
    Marcuccio, Fabio
    Soulias, Dimitrios
    Chau, Chalmers C. C.
    Radford, Sheena E.
    Hewitt, Eric
    Actis, Paolo
    Edwards, Martin Andrew
    ACS NANOSCIENCE AU, 2023, 3 (02): : 172 - 181
  • [26] An Engineered OmpG Nanopore with Displayed Peptide Motifs for Single-Molecule Multiplex Protein Detection
    Foster, Joshua C.
    Pham, Bach
    Pham, Ryan
    Kim, Minji
    Moore, Matthew D.
    Chen, Min
    ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2023, 62 (07)
  • [27] Single-molecule DNA detection using a novel SP1 protein nanopore
    Wang, Hai-Yan
    Li, Yang
    Qin, Li-Xia
    Heyman, Arnon
    Shoseyov, Oded
    Willner, Itamar
    Long, Yi-Tao
    Tian, He
    CHEMICAL COMMUNICATIONS, 2013, 49 (17) : 1741 - 1743
  • [28] Nanopore-Based Single-Molecule Mass Spectrometry on a Lipid Membrane Microarray
    Baaken, Gerhard
    Ankri, Norbert
    Schuler, Anne-Katrin
    Ruehe, Juergen
    Behrends, Jan C.
    ACS NANO, 2011, 5 (10) : 8080 - 8088
  • [29] SINGLE-MOLECULE DETECTION AND MANIPULATION WITH BIOLOGICAL NANOPORES
    Schiopu, Irina
    Asandei, Alina
    Mereuta, Loredana
    Dragomir, Isabela
    Bucataru, Cezara
    Luchian, Tudor
    STUDIA UNIVERSITATIS BABES-BOLYAI CHEMIA, 2021, 66 (03): : 161 - 174
  • [30] Single-molecule mass spectrometry in solution using a solitary nanopore
    Robertson, Joseph W. F.
    Rodrigues, Claudio G.
    Stanford, Vincent M.
    Rubinson, Kenneth A.
    Krasilnikov, Oleg V.
    Kasianowicz, John J.
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2007, 104 (20) : 8207 - 8211