Molecular epidemiology of Crimean-Congo haemorrhagic fever virus in India

被引：3
作者：
Singh, P. [1 ]
Chhabra, M. [1 ]
Sharma, P. [1 ]
Jaiswal, R. [1 ]
Singh, G. [1 ]
Mittal, V. [1 ]
Rai, A. [1 ]
Venkatesh, S. [1 ]
机构：
[1] Natl Ctr Dis Control, Delhi, India
来源：
EPIDEMIOLOGY AND INFECTION | 2016年 / 144卷 / 16期
关键词：
Crimean-Congo haemorrhagic fever; N gene; molecular epidemiology; phylogenetic analysis; RNA SEGMENTS;
D O I：
10.1017/S0950268816001886
中图分类号：
R1 [预防医学、卫生学];
学科分类号：
1004 ; 120402 ;
摘要：
Crimean-Congo haemorrhagic fever (CCHF) is an emerging zoonotic disease in India which is prevalent in neighbouring countries. CCHF virus (CCHFV) is a widespread tick-borne virus which is endemic in Africa, Asia, Eastern Europe and the Middle East. In the present study, samples of clinically suspected human cases from different areas of northern-western India were tested for the presence of CCHFV by RT-PCR through amplification of nucleocapsid (N) gene of CCHFV. Positive samples were sequenced to reveal the prevailing CCHFV genotype(s) and phylogenetic relatedness. A phylogenetic tree revealed the emergence of diverse strains in the study region showing maximum identity with the Pakistan, Afghanistan and Iran strains, which was different from earlier reported Indian strains. Our findings reveal for the first time the emergence of the Asia 1 group in India; while earlier reported CCHFV strains belong to the Asia 2 group.
引用
收藏
页码：3422 / 3425
页数：4
相关论文
共 14 条
[1]   Evolution of Crimean-Congo Hemorrhagic Fever virus [J].
Anagnostou, Vassiliki ;
Papa, Anna .
INFECTION GENETICS AND EVOLUTION, 2009, 9 (05) :948-954
[2]   NOSOCOMIAL OUTBREAK OF VIRAL HEMORRHAGIC-FEVER CAUSED BY CRIMEAN HEMORRHAGIC-FEVER CONGO VIRUS IN PAKISTAN, JANUARY 1976 [J].
BURNEY, MI ;
GHAFOOR, A ;
SALEEN, M ;
WEBB, PA ;
CASALS, J .
AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE, 1980, 29 (05) :941-947
[3]   Ancient common ancestry of Crimean-Congo hemorrhagic fever virus [J].
Carroll, Serena A. ;
Bird, Brian H. ;
Rollin, Pierre E. ;
Nichol, Stuart T. .
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2010, 55 (03) :1103-1110
[4]   Co-evolutionary patterns of variation in small and large RNA segments of Crimean-Congo hemorrhagic fever virus [J].
Chamberlain, J ;
Cook, N ;
Lloyd, G ;
Mioulet, V ;
Tolley, H ;
Hewson, R .
JOURNAL OF GENERAL VIROLOGY, 2005, 86 :3337-3341
[5]   Crimean-Congo hemorrhagic fever virus genomics and global diversity [J].
Deyde, Varough M. ;
Khristova, Marina L. ;
Rollin, Pierre E. ;
Ksiazek, Thomas G. ;
Nichol, Stuart T. .
JOURNAL OF VIROLOGY, 2006, 80 (17) :8834-8842
[6]   Molecular diagnostics of viral hemorrhagic fevers [J].
Drosten, C ;
Kümmerer, BM ;
Schmitz, H ;
Günther, S .
ANTIVIRAL RESEARCH, 2003, 57 (1-2) :61-87
[7]   Crimean-Congo haemorrhagic fever [J].
Ergönül, Ö .
LANCET INFECTIOUS DISEASES, 2006, 6 (04) :203-214
[8]   Crimean-Congo haemorrhagic fever virus: sequence analysis of the small RNA segments from a collection of viruses world wide [J].
Hewson, R ;
Chamberlain, J ;
Mioulet, V ;
Lloyd, G ;
Jamil, B ;
Hasan, R ;
Gmyl, A ;
Gmyl, L ;
Smirnova, SE ;
Lukashev, A ;
Karganova, G ;
Clegg, C .
VIRUS RESEARCH, 2004, 102 (02) :185-189
[9]   EPIDEMIOLOGY OF TICK-BORNE CRIMEAN-CONGO HEMORRHAGIC-FEVER IN ASIA, EUROPE, AND AFRICA [J].
HOOGSTRAAL, H .
JOURNAL OF MEDICAL ENTOMOLOGY, 1979, 15 (04) :307-417
[10]   Crimean-Congo hemorrhagic fever in Albania, 2001 [J].
Papa, A ;
Bino, S ;
Llagami, A ;
Brahimaj, B ;
Papadimitriou, E ;
Pavlidou, V ;
Velo, E ;
Cahani, G ;
Hajdini, M ;
Pilaca, A ;
Harxhi, A ;
Antoniadis, A .
EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES, 2002, 21 (08) :603-606
12