Quadratic adaptive algorithm for solving cardiac action potential models

被引:6
作者
Chen, Min-Hung [1 ]
Chen, Po Yuan [2 ]
Luo, Ching-Hsing [3 ,4 ]
机构
[1] Natl Cheng Kung Univ, Dept Math, 1 Univ Rd, Tainan 701, Taiwan
[2] Kaohsiung Med Univ, Dept Engn & Maintenance, Chung Ho Mem Hosp, 100 Tzyou 1st Rd, Kaohsiung 807, Taiwan
[3] Natl Cheng Kung Univ, Dept Elect Engn, 1 Univ Rd, Tainan 701, Taiwan
[4] Natl Sun Yat Sen Univ, Inst Med Sci & Technol, 70 Lienhai Rd, Kaohsiung 80424, Taiwan
关键词
Computer simulation; Action potential; Numerical method; Cardiac action potential model; Adaptive method; BIDOMAIN EQUATIONS; NUMERICAL-INTEGRATION; ELECTRICAL-ACTIVITY; HUXLEY EQUATIONS; BRUGADA-SYNDROME; REPOLARIZATION; MECHANISMS; HODGKIN; RECONSTRUCTION; PHENOTYPE;
D O I
10.1016/j.compbiomed.2016.09.001
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
An adaptive integration method is proposed for computing cardiac action potential models accurately and efficiently. Time steps are adaptively chosen by solving a quadratic formula involving the first and second derivatives of the membrane action potential. To improve the numerical accuracy, we devise an extremum-locator (el) function to predict the local extremum when approaching the peak amplitude of the action potential. In addition, the time step restriction (tsr) technique is designed to limit the increase in time steps, and thus prevent the membrane potential from changing abruptly. The performance of the proposed method is tested using the Luo-Rudy phase 1 (LR1), dynamic (LR2), and human O'Hara-Rudy dynamic (ORd) ventricular action potential models, and the Courtemanche atrial model incorporating a Markov sodium channel model. Numerical experiments demonstrate that the action potential generated using the proposed method is more accurate than that using the traditional Hybrid method, especially near the peak region. The traditional Hybrid method may choose large time steps near to the peak region, and sometimes causes the action potential to become distorted. In contrast, the proposed new method chooses very fine time steps in the peak region, but large time steps in the smooth region, and the profiles are smoother and closer to the reference solution. In the test on the stiff Markov ionic channel model, the Hybrid blows up if the allowable time step is set to be greater than 0.1 ms. In contrast, our method can adjust the time step size automatically, and is stable. Overall, the proposed method is more accurate than and as efficient as the traditional Hybrid method, especially for the human ORd model. The proposed method shows improvement for action potentials with a non -smooth morphology, and it needs further investigation to determine whether the method is helpful during propagation of the action potential. (C) 2016 Elsevier Ltd. All rights reserved.
引用
收藏
页码:261 / 273
页数:13
相关论文
共 25 条
[1]   Linking a genetic defect to its cellular phenotype in a cardiac arrhythmia [J].
Clancy, CE ;
Rudy, Y .
NATURE, 1999, 400 (6744) :566-569
[2]   Ionic mechanisms underlying human atrial action potential properties: insights from a mathematical model [J].
Courtemanche, M ;
Ramirez, RJ ;
Nattel, S .
AMERICAN JOURNAL OF PHYSIOLOGY-HEART AND CIRCULATORY PHYSIOLOGY, 1998, 275 (01) :H301-H321
[3]   Ionic mechanisms responsible for the electrocardiographic phenotype of the Brugada syndrome are temperature dependent [J].
Dumaine, R ;
Towbin, JA ;
Brugada, P ;
Vatta, M ;
Nesterenko, DV ;
Nesterenko, VV ;
Brugada, J ;
Brugada, R ;
Antzelevitch, C .
CIRCULATION RESEARCH, 1999, 85 (09) :803-809
[4]   MOVEMENT OF RADIOACTIVE POTASSIUM AND MEMBRANE CURRENT IN A GIANT AXON [J].
HODGKIN, AL ;
HUXLEY, AF .
JOURNAL OF PHYSIOLOGY-LONDON, 1953, 121 (02) :403-414
[5]   A QUANTITATIVE DESCRIPTION OF MEMBRANE CURRENT AND ITS APPLICATION TO CONDUCTION AND EXCITATION IN NERVE [J].
HODGKIN, AL ;
HUXLEY, AF .
JOURNAL OF PHYSIOLOGY-LONDON, 1952, 117 (04) :500-544
[6]   A numerical method for the solution of the bidomain equations in cardiac tissue [J].
Keener, JP ;
Bogar, K .
CHAOS, 1998, 8 (01) :234-241
[7]   Numerical solution of the bidomain equations [J].
Linge, S. ;
Sundnes, J. ;
Hanslien, M. ;
Lines, G. T. ;
Tveito, A. .
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES, 2009, 367 (1895) :1931-1950
[8]   A MODEL OF THE VENTRICULAR CARDIAC ACTION-POTENTIAL - DEPOLARIZATION, REPOLARIZATION, AND THEIR INTERACTION [J].
LUO, CH ;
RUDY, Y .
CIRCULATION RESEARCH, 1991, 68 (06) :1501-1526
[9]   A DYNAMIC-MODEL OF THE CARDIAC VENTRICULAR ACTION-POTENTIAL .1. SIMULATIONS OF IONIC CURRENTS AND CONCENTRATION CHANGES [J].
LUO, CH ;
RUDY, Y .
CIRCULATION RESEARCH, 1994, 74 (06) :1071-1096
[10]  
MCALLISTER RE, 1975, J PHYSIOL-LONDON, V251, P1