PRESENT AND FUTURE OF MEMBRANE PROTEIN STRUCTURE DETERMINATION BY ELECTRON CRYSTALLOGRAPHY

被引:19
|
作者
Ubarretxena-Belandia, Iban [1 ]
Stokes, David L. [2 ,3 ,4 ]
机构
[1] Mt Sinai Sch Med, Dept Struct & Chem Biol, New York, NY 10029 USA
[2] NYU, Sch Med, Skirball Inst, New York, NY USA
[3] NYU, Sch Med, Dept Cell Biol, New York, NY 10016 USA
[4] New York Struct Biol Ctr, Div Cryoelectron Microscopy, New York, NY USA
来源
ADVANCES IN PROTEIN CHEMISTRY AND STRUCTURAL BIOLOGY: RECENT ADVANCES IN ELECTRON CRYOMICROSCOPY, PT A | 2010年 / 81卷
基金
美国国家科学基金会;
关键词
X-RAY-STRUCTURE; NICOTINIC ACETYLCHOLINE-RECEPTOR; MULTIDRUG TRANSPORTER EMRE; LIGHT-HARVESTING COMPLEX; IMAGE-PROCESSING LIBRARY; 3-DIMENSIONAL STRUCTURE; 2D CRYSTALLIZATION; PURPLE MEMBRANE; 2-DIMENSIONAL CRYSTALLIZATION; CRYOELECTRON MICROSCOPY;
D O I
10.1016/B978-0-12-381357-2.00002-5
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Membrane proteins are critical to cell physiology, playing roles in signaling, trafficking, transport, adhesion, and recognition. Despite their relative abundance in the proteome and their prevalence as targets of therapeutic drugs, structural information about membrane proteins is in short supply. This chapter describes the use of electron crystallography as a tool for determining membrane protein structures. Electron crystallography offers distinct advantages relative to the alternatives of X-ray crystallography and NMR spectroscopy. Namely, membrane proteins are placed in their native membranous environment, which is likely to favor a native conformation and allow changes in conformation in response to physiological ligands. Nevertheless, there are significant logistical challenges in finding appropriate conditions for inducing membrane proteins to form two-dimensional arrays within the membrane and in using electron cryo-microscopy to collect the data required for structure determination. A number of developments are described for high-throughput screening of crystallization trials and for automated imaging of crystals with the electron microscope. These tools are critical for exploring the necessary range of factors governing the crystallization process. There have also been recent software developments to facilitate the process of structure determination. However, further innovations in the algorithms used for processing images and electron diffraction are necessary to improve throughput and to make electron crystallography truly viable as a method for determining atomic structures of membrane proteins.
引用
收藏
页码:33 / +
页数:9
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