Numerical approximation of a 3D mechanochemical interface model for skin patterning

被引:7
|
作者
Vilaca, Luis Miguel De Oliveira [1 ,2 ]
Milinkovitch, Michel C. [1 ,2 ]
Ruiz-Baier, Ricardo [3 ,4 ]
机构
[1] Univ Geneva, Dept Genet & Evolut, LANE, 4 Blvd Yvoy, CH-1205 Geneva, Switzerland
[2] SIB Swiss Inst Bioinformat, Geneva, Switzerland
[3] Univ Oxford, Math Inst, Oxford OX2 6GG, England
[4] Sechenov Univ, Inst Personalised Med, Lab Math Modelling, Moscow, Russia
基金
瑞士国家科学基金会; 英国工程与自然科学研究理事会;
关键词
Elasticity-diffusion problem; Interface coupling; Pattern formation; Skin appendage modelling; Finite element methods; Adaptive time stepping; OPTIMIZED SCHWARZ METHODS; FINITE-ELEMENT-METHOD; DIFFUSION; MULTISCALE; ANGIOGENESIS; ELASTICITY; SIMULATION; MECHANICS; SYSTEMS;
D O I
10.1016/j.jcp.2019.01.023
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
We introduce a model for the mass transfer of molecular activators and inhibitors in two media separated by an interface, and study its interaction with the deformations exhibited by the two-layer skin tissue where they occur. The mathematical model results in a system of nonlinear advection-diffusion-reaction equations including cross-diffusion, and coupled with an interface elasticity problem. We propose a Galerkin method for the discretisation of the set of governing equations, involving also a suitable Newton linearisation, partitioned techniques, non-overlapping Schwarz alternating schemes, and high-order adaptive time stepping algorithms. The experimental accuracy and robustness of the proposed partitioned numerical methods is assessed, and some illustrating tests in 2D and 3D are provided to exemplify the coupling effects between the mechanical properties and the advectiondiffusion-reaction interactions involving the two separate layers. (C) 2019 The Authors. Published by Elsevier Inc.
引用
收藏
页码:383 / 404
页数:22
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